EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-00442

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr1:137325860-137326840

Target genes

Number: 7
Name	Ensembl ID

Elf3	ENSMUSG00000003051
Rnpep	ENSMUSG00000041926
Timm17a	ENSMUSG00000062580
Shisa4	ENSMUSG00000041889
Ipo9	ENSMUSG00000041879
Nav1	ENSMUSG00000009418
Csrp1	ENSMUSG00000026421

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SOX10	MA0442.2	chr1:137326197-137326208	AAAACAAAGGA	+	6.32
STAT1	MA0137.3	chr1:137326332-137326343	TTTCTAGGAAA	+	6.14
Sox3	MA0514.1	chr1:137326197-137326207	AAAACAAAGG	-	6.02
Stat6	MA0520.1	chr1:137325945-137325960	ATTTCTGAGGAAGCC	-	6.25

Enhancer Sequence

CCACTTCTTT TCAATAAAAA GTCCTGCAGG AGTATTAACT CAAGGCTTTG AGGGTGGTTG 60
GTCAAATATG GAAACAATCT CCCATATTTC TGAGGAAGCC TAAGTTTAAG GAGCAGTGGA 120
AATATTCCCT TGAGCTTGGG GATTCCGAGG ATCTGGAATT CCGAATCAGG TACGTTTCTT 180
ACATAAAGAC CAAGGAGACT TGACCCTTTT TTCTGTTCTT TGTGAAAACA GGCCCGCTGA 240
AAGCCCACTA AACAGGAAAT TAAAAGAAAA CGTCAAGCTA ATAGTTTCTT CTCTAACACG 300
TTAAAGAACA TAACGGGAGG ATGAGAACAA AGAATCTAAA ACAAAGGAAG ATCGGTTCCT 360
GTACATAGAA ATGCACAGTA ATTTAATAAT TGCCATTAAG TCTTTAAAAA ACAAAAAACA 420
AACGGGAAGC ATGGTCGGAA AGTGAAGCGT CGTATGCATC GGATTGAGTT GATTTCTAGG 480
AAAACGTGAT GTGTCTGAAC AACCAGCCAG ATTTAAAACT CTGATGCTGA AACTTGTTCG 540
ATGGTGGCCG CCTCCTTAAG GGCCTTACTT CTGGCTCTTC TCTAGCTCCC TTCCCTGATC 600
CCACTACAAC AGAGCTGGTG AAGAAAACGG CAAAAAGACC TTGTCTTGGG CTCAGAGATC 660
ATCTAGATTG CGCGACACCG CCAGCACCAC GTCGAACTTC ATTTCTGTCC TCGGCAGAAC 720
CCCGCCACTA TCTATCTATC TTTTCAAGTC TTCCCCCACC CCATCCCCGC TAAGGCTCCA 780
CCTCCCCCGA CCCTTTCCTT TCAGACGCGC CACCCTTCTT CTAGGACTTT CCCAGCCACC 840
AGCGGCACCC CCACCCCCAC GTTTCCTAAT CCACTCCTGA CGCCCACCTC TCCGCTGGCT 900
CAAGATCCCC AAATCCCTAC GGTCAGCGGA CTGTGCGGCC GGCCCTGGTC CGAACCATCC 960
TCGTGACGGT CCCGCCTCAC 980