EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM061-00106

Organism

Mus musculus

Tissue/cell

Forelimb_bud_embryo

Coordinate

chr1:44608710-44610710

Target genes

Number: 2
Name	Ensembl ID

Gulp1	ENSMUSG00000056870
Gm16102	ENSMUSG00000089877

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PHOX2A	MA0713.1	chr1:44610670-44610681	TAATTCAATTA	+	6.14
Phox2b	MA0681.1	chr1:44610670-44610681	TAATTCAATTA	+	6.14
SOX10	MA0442.2	chr1:44610601-44610612	TTCTTTGTTTT	-	6.62
ZNF263	MA0528.1	chr1:44610035-44610056	CCTTTCCCTCCTTCTTCCTCA	-	6.22

Enhancer Sequence

AGCCAGGGTA GGAAGCGGGA GCGTCTCTGG TCCGGCCAGC TATGGCCAGG TGGCGCGGAA 60
CCAGGAACAG ACCCCGAGAG GAAAGCGCAG TTAGCAGGAG GGTGAGGAGG GCACCGGGCT 120
GCGACCGCTT ATAGGTTGCG CAGATTCCGA CCCCGAGGGC ACAGGGAGTC TGTGGGCACT 180
GAAAGAGGGA CCTGTTGCTG CAGGCGGGGG CAGTGAGGGA GGAAGATGGG GCCACCCAGG 240
GACGCCAGCC CTGTGCCTTC CCGCCGCATC CTCCCCTCGA CCCAAGGAGG AACTTCTGGG 300
CGAGGTGGGG GCTAGCAGGC GTCGGGAGCA AGCGGTGGGG GGACGCTGGA CCATCCCGCC 360
CGCTGCGGGT GCATGGAACA GAGGCTGCTC AGCAAAAGGA GGCATCGCTG GGTCAACTAG 420
GCGACCCGAG AGCCAACTTC CTCCAGCTTG GTCTCGCTTT GTTTGGGTCG CTGTAAAAAT 480
GTGGGCAGCG GCAGGGGAGG CGGCAAGGAG CTTGTGACTG GGCCGCAGAT ACTTTAAAGC 540
CCTACGTGGG TAGGGCCCCC ACTCTCGGGC GGTGTCCATG CGGCTGCCCT TTGGCTAGGC 600
CGGTCAGATC CCCGCTTCTG CGGGCGTTAT GTTAGTGGGA CTCAGCTTGC CAAGCTTGCT 660
TGCTCTGGTC CACCTCCTGG TGGTGGCCCA ACTGGCTCTC TATCCTGGGG CTGCTGGGCT 720
GATTTCCCTG TTTGCAGGAG GGAACTCTGG GCAGTCTAGT TTTCTTGGAA TGTGTTTACA 780
ATGTAGAATG GGACTTGAAC AGGAAGCTGA ACGCTGCAGC TAGAAATAGC GTGCCAAGGT 840
AGAGTGAGGG AGATACAGCT GCTGTTGGGG AAACTCTCAA GTGTGGGCTG GCAGTCAAGG 900
AACACCCCTA CCTCACCCCG ACACACACAC ACACACACAC ACACACACGC ACACGCACAC 960
ACACACACAC AGCGTCTTAG TTTTTCTTGA TGGAGCTTGT CTTTGTTAAT AGACATTTAC 1020
GTGCGATATT TCAGTCTGTT TGACAACATA ATATCAATTA GGAAGATTTA ATAACTGTGT 1080
ATTCTGTCTG CTTTTAAAAA TGCTGCACCA ACATTTAAGA ATGAAAACTT TCTAGACTCT 1140
GTCAATTCTA TTAATTCTAG GGCTTGCAGA GGCCAGGATA CCTATGATTT TATGTAGTCC 1200
ATATGGCTGA ACAGGTCGTA AAAGAGTACG AATTAGAAAA CAGAGTAAAC GATGAGAGGT 1260
GGAAAATCCT GAAAGGAATT GGATTTTTTT TTTCAGTTTT GCAAATTGCC TGGTTGCTCT 1320
GCCAGCCTTT CCCTCCTTCT TCCTCATAAT CAAATAGCTA GAAATTGCTA GAAAACCCAC 1380
CGAATGGGAG AGTTTGGACG CTGGTGTCTG CAAGCTTTTC TAGAAACAAC GGTGAGACTA 1440
AGGTACTGCT TCACTGCATA ATTAAACTCT CCTTGAGCTG TCCAGGAGCA TTTCCCAAGT 1500
TTTTAAGACT GACAAGAAAA GAATGGAAGA ATCTGGCAGG CAGCCAAACT AGACTGAACT 1560
CAGTAGGCAG GCCTGAAAGA GACTCGGGAA GTTGCAGGGC ATAATTTGAA TGGCTTGGTG 1620
GTGGTACTGG GGCTTAAATA GGGGGGTTCT TTTAAAATGA AAACTTTAAA TGACTAAGAG 1680
TCTTTGGGGA AAAAAATAAA AACAAAAACA ATTGACTAAG CATAGAATGC AGTTGAATAT 1740
CAAGGAGAGT TAAGAAGGCC CAAAGGGAAG TGTGGTCCTT TCCACCCTTG CTCTGAAATA 1800
GCAACAGTTT GCGTGTGCTT ACCCTGTTAC TCGGTCTTCT CCAGATGCAC CTTGTTAGCT 1860
GCCACTTCAG TCCTTCAGGC CTTGACCTTT CTTCTTTGTT TTCATGGCCA GTAAGAATGA 1920
AAGACCAGCA CTGAGCAGAT GGTTTTCCAC CTAAATTGAT TAATTCAATT AATTTCAGAT 1980
AGCTTGGATT TGGGATCATA 2000