EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM060-00916

Organism

Mus musculus

Tissue/cell

Forebrain_E12.5

Coordinate

chr11:120688230-120688850

Target genes

Number: 21
Name	Ensembl ID

Ccdc137	ENSMUSG00000049957
Mrpl12	ENSMUSG00000039640
Slc25a10	ENSMUSG00000025792
Ppp1r27	ENSMUSG00000025129
P4hb	ENSMUSG00000025130
Arhgdia	ENSMUSG00000025132
Alyref	ENSMUSG00000025134
Pcyt2	ENSMUSG00000025137
Sirt7	ENSMUSG00000025138
Mafg	ENSMUSG00000051510
Pycr1	ENSMUSG00000025140
Aspscr1	ENSMUSG00000025142
Lrrc45	ENSMUSG00000025145
Rac3	ENSMUSG00000018012
Dcxr	ENSMUSG00000039450
Rfng	ENSMUSG00000025158
Gps1	ENSMUSG00000025156
Dus1l	ENSMUSG00000025155
Fasn	ENSMUSG00000025153
Slc16a3	ENSMUSG00000025161
Gm11793	ENSMUSG00000082510

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF740	MA0753.2	chr11:120688580-120688593	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:120688583-120688596	GGGGGGGGGGTGG	-	6.44

Enhancer Sequence

TGGACACTCT ACAGGCAAGA AGTAGAAAAA GATGTAGGTT AGGAACATGG GAAGGGTATG 60
TGCTCAGAGT TGGTCATGTC ATAACAACCT GTAGGGACTC ATATTCTGTT TTTCTTTGTG 120
AGAGCCTATA CAGGCCAGCA GGCCCTCCAT AGTGACCTAG CACTAGCCAG TGGCAGCAAC 180
TGTGTTGGGT CCTGACTAGG GTGCAAGAGG TGTGTGTGGG CATGGGCTTC ACATATTTTC 240
AACTGATCCT AGGCCTGCCT CTCCCCTAGC ACACAGAAAT CTGGGCTATG GAAACAAAAG 300
AAAGCAAAAA CCAAAACACC CTGAGATGCT GTGACTGTTT CCTAAGGGCT GGGGGGGGGG 360
GGGTGGCGGC GGTAGCAGGT GGCCCCCCCT CCCATTCAAG CCAGGCTACC CCATTGAGAG 420
TTCAGTCCTT CCTCGTCCTG TCCCTGGGGC TTGAGTATAA CAGGGAGTGT TCATGAACGC 480
TTCTGACCAC TTACATCCCT AACAGAGACA GGCCAAGGAC TGTCTGGCAA GCTGTACTCC 540
ACACGGGTAC AGGTTAAAGC CTAGAGCAGC CCTGCCAGTG TCCACTTGAA CCATGGTCTA 600
AGTGGTCATT TTACTGCTGC 620