EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM060-00648

Organism

Mus musculus

Tissue/cell

Forebrain_E12.5

Coordinate

chr11:69726370-69726620

Target genes

Number: 20
Name	Ensembl ID

Cd68	ENSMUSG00000018774
Polr2a	ENSMUSG00000005198
Chrnb1	ENSMUSG00000041189
Fgf11	ENSMUSG00000042826
Spem1	ENSMUSG00000041165
Nlgn2	ENSMUSG00000051790
Tnk1	ENSMUSG00000001583
Kctd11	ENSMUSG00000046731
2810408A11Rik	ENSMUSG00000018570
Neurl4	ENSMUSG00000047284
Gps2	ENSMUSG00000023170
Eif5a	ENSMUSG00000078812
Ybx2	ENSMUSG00000018554
Slc2a4	ENSMUSG00000018566
Cldn7	ENSMUSG00000018569
Ctdnep1	ENSMUSG00000018559
Gabarap	ENSMUSG00000018567
Phf23	ENSMUSG00000018572
Acadvl	ENSMUSG00000018574
Dlg4	ENSMUSG00000020886

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

STAT1	MA0137.3	chr11:69726531-69726542	TTTCCCAGAAA	-	6.02
STAT3	MA0144.2	chr11:69726531-69726542	TTTCCCAGAAA	-	6.32

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01233	chr11:69689609-69762832	Th_Cells
mSE_06261	chr11:69726092-69736700	E14.5_Liver

Enhancer Sequence

AGTAGATGAG AAGTGCACTT GGAGTGTTTG GAAGACGTGA ACTAGAGTGC CAGGGTAAAT 60
AAACACATGA AGAGTGCTGG GGAGGAGTTA GCTGAGCAGG CCAGGGGAGG AGAGTACTAC 120
ATACACAATA GTTGGTGCTA AGCCAGTCAC GGTGAACAGT ATTTCCCAGA AAACAGCAAG 180
GCCTGGGTGG AGGGGGCAGA ATTAGCAGTC ATGGACCTTG GGAGCCTTAC TCTTCTCTCG 240
TTTCTGCTTG 250