EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
MM059-05292 
Organism
Mus musculus 
Tissue/cell
Forebrain_E11.5 
Coordinate
chr3:88024140-88030430 
Target genes
TF binding sites/motifs
Number: 23             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
POU1F1MA0784.1chr3:88026244-88026258CTTATTTGCATATA-6.32
POU2F1MA0785.1chr3:88026256-88026268TATTTGCATAAT-6.32
POU2F2MA0507.1chr3:88026244-88026257CTTATTTGCATAT+6.57
POU3F3MA0788.1chr3:88026255-88026268ATATTTGCATAAT-6.29
RESTMA0138.2chr3:88024946-88024967TCCAGCACCACGGACAGCTCC+10.48
RFX1MA0509.2chr3:88025748-88025764TGTTGCCATAGCAACC+7.18
RFX1MA0509.2chr3:88025748-88025764TGTTGCCATAGCAACC-7.19
RFX2MA0600.2chr3:88025748-88025764TGTTGCCATAGCAACC+7.6
RFX2MA0600.2chr3:88025748-88025764TGTTGCCATAGCAACC-7.7
RFX3MA0798.1chr3:88025748-88025764TGTTGCCATAGCAACC-7.52
RFX3MA0798.1chr3:88025748-88025764TGTTGCCATAGCAACC+7.66
RFX4MA0799.1chr3:88025748-88025764TGTTGCCATAGCAACC+6.88
RFX4MA0799.1chr3:88025748-88025764TGTTGCCATAGCAACC-7.12
RFX5MA0510.2chr3:88025748-88025764TGTTGCCATAGCAACC-7.79
RFX5MA0510.2chr3:88025748-88025764TGTTGCCATAGCAACC+7.87
RREB1MA0073.1chr3:88025760-88025780AACCACCCCAACCCCCAACC+6.09
STAT1MA0137.3chr3:88026099-88026110TTTCCCAGAAA-6.02
STAT3MA0144.2chr3:88026099-88026110TTTCCCAGAAA-6.32
STAT3MA0144.2chr3:88029663-88029674TTTCCCAGAAG-6.62
TBX21MA0690.1chr3:88027433-88027443AAGGTGTGAA+6.02
YY1MA0095.2chr3:88030310-88030322GCTGCCATCTTG-6.32
ZBTB18MA0698.1chr3:88024410-88024423CATACAGATGTTT+6.01
ZNF263MA0528.1chr3:88026391-88026412GAGGCAGGAAGAGGATGGAAA+6.01
Number of super-enhancer constituents: 6             
IDCoordinateTissue/cell
mSE_03757chr3:88023080-88026113Cerebellum
mSE_03757chr3:88028403-88031216Cerebellum
mSE_04018chr3:88022088-88027145Cortex
mSE_04018chr3:88027586-88030432Cortex
mSE_04384chr3:88016859-88031229E14.5_Brain
mSE_10788chr3:88024578-88027221Olfactory_bulb
Enhancer Sequence
GACCCTCTGG TTGAGGGGAG TCGCATACCC GCAGGTCGTG GCACCCATGC TCTGTGACCA 60
TGCAAGGGTA CCCTGTGGGG ACACTGCACA TCATTGTCTT GTCTGGGGTG AGTTTCCACA 120
GCCCAGAAGA GGCAAGCCTG ACACCAGACT AAGCCTCTCT TCCCTGTCCT TCCCTTCCTC 180
CAGCAGTTCA AGCACCTCTT CTTATCCACA TACATCCTGC GGAGCCAGTG CTTCTAGGCT 240
TGGTTACACA CCAAAGCCGC CCTTCACCCC CATACAGATG TTTGGGCTTG GCCCAGCCCC 300
CAAAAAAACT CAGAGAGGAA ATGAAGCTTT GGAGTCTGTA CCAACAGATA CACTCTCCTG 360
TCTGTGCTCA GGACAACAAT CTCACCTTCC CAAGTCCCTG ATCTATCTAT AATGCCCTTG 420
TTCATCTTTA TTACTAAATT ACTTGAAGAG CCCTTAGTAT TTAGAATGGA ATTTAAAGGT 480
CCATCTTTGA CCTCAGTCTT GCTCTTCCCT AAGGCCAAAA GCACTGGCTC AGGCTCACAG 540
GAGCCTGTGG CTTTTCCAAA TGGATCCAGT GGAGAGCTGA GCTCATCTGA GTCCCCTGAA 600
CATCCTGGGA CTAAGGGTGG GGAGTGCAGG ATTCATAGAC TCCAGCACCC TCCCTTCCAG 660
GAGCAGGAGA CTTCCTTCAA AATCCTCTTT TCCCTTTCCT TACTGTATCC AAATGTTTCT 720
GCTTCTCTTC CCTCCAGCTT CTCCCCTGGG GGCGGGTGGG TGCTCCACCC TCCCGCCCAC 780
TCTCTGAGGA CATGAGGAAC ATGGTATCCA GCACCACGGA CAGCTCCCAG CGGTGAGTGA 840
GCCTGCTGAC CCCTGTAGGA AAATGGTGGT TTTGTCTATT CCAGGCAGAC ATCCTGCACT 900
ACATTCCAGA TCTGATGAGG CATGGCTGCC CCAGGATTAC TGGGCTCGGA CGGGAGCAGT 960
GGTAGGAAGG ATCCTATATA AGTCATGTGA GACATAGAAT GTTCAGATCA ACTGAAGCTG 1020
AAACAAGCCT TTGGCATCAT ATATAACCCA GAAAGGGACA AAGCTGGTGA GTGAACTCCT 1080
GAATCCAGCC TAGCCTTTTC TGCACTGATT CCCCTTTATG AACCTCCTTG CCCAATTCTG 1140
GCAGGAGATT TACATGAGAT GTTACACACA AAAGGGCAGG ATACATGTCT GGGAATGTGA 1200
AGTATCCCTA AGAACCAGGG AAAGGTGGAA CTGACTGCTC TCACCGTCTG AGAAGGCTTT 1260
GAAGGGAAAG TCCTGAAGAA GGCATGGGGA AGGCTTACCT AGCAAAAAGG CAAGGGAGCC 1320
ACCATCTGCC AGGGTATAGA GGCCAGTGGA TGGCCCCAGG AGTCTCTGGA GGCCAGCAGG 1380
AGGCATGCAG ACTGGACTGG GGCCTGGGAA AGGCCCTTCT GTGTGCCCAC GCTTGCTCCC 1440
CCTACACCAT GAGTCTAGAG ACAAAGGGAC CACTCTCTCA CATTTGACAC TGCCATCTCC 1500
GGCTGGCAGT GCCAGGTGGC AGGGGCATCA GGGGTGTCAA TCCATTATCC ACTCCCAGCC 1560
CCTAAGTCCT CTGGGGCTGA ATGTTGGGGA GGTGGGTGTT CTACGCTATG TTGCCATAGC 1620
AACCACCCCA ACCCCCAACC CCAAAGCACA CAAAAAGATA GCTCTCACCC CCACCTCTAG 1680
GAGAAACCTG GGTCTGCCTG GGAATCTTCC CTTGAGAATC CTCCTCTCTA ATGCACAGCC 1740
ATGCCATTCT TGTGTCTGCA CCATCCTCAG TACCCGGCGC CAAAGACCCA TAGGGCAGTG 1800
AGACTGGTAC GTTCAGTATT CAGGCATGTA GAGGGGGCAT CCATCCCTTC TAGTTAACCC 1860
CTCTCTCCTC AAGCACTCAC GTCCTTCACT ACAGCCAACG CCATCCTAGG ACTCCCCAAC 1920
TGAAGCAGTG GGCTATGTTG GGACCCCGGC CTTCTGCTTT TTCCCAGAAA TAGACACCTG 1980
CTACCTTTAG CAAACCTCCA GGCTGTGGGA ACTGCAAGGA GGAGGGAGCC ATTCCTGACA 2040
CCCTCCATCT GTACCCTCGC CATTACTCAT TAGGCATTCT GCCCCCTCCT TCCGCTCGTT 2100
AAGCCTTATT TGCATATATT TGCATAATAC AGTTCATTTG CATTGCAGGA GGCTCATGGT 2160
AGAAGCCAGG AAAAAAAAGA GGTGGGGGGG TGGAGAAGAG AAAAAGGGAG AGATTTTGTT 2220
TTCATCAAAG TGTGGGGGGA GAGCTGGGGG GGAGGCAGGA AGAGGATGGA AATAAAACTC 2280
ATACTACTTT CTTTCTTCCC TCCGCCCTCT CTCCCCGAGT TGGACTGAAA TGCCAAAGAG 2340
AGGTGCCAAG GGTCTGCCTT TTCTGTCCTT TTTTTTGTCT TGCTTCCTCC GGCCTTGGCT 2400
CTTCAGTCAG GGGGCCCCCC ACCTTGTTGG AATCAGGCTT CAGAAAGAAA GCTGGGTAGG 2460
ATGTGAGGCT GTGAGAATGG AAACATAGGA AGGGAAGAGG GAAGCCGCCA TCTTAGGTAG 2520
CTAGTGTTTA TAAAATGGCC GCTTCTGAGA GATGTGGGCT GAGTGCCAGG CAGGGTGGTG 2580
GGCACGAAGG AGAATGACAA CAGAAGGAAG GGTTTCCCAG CTGACCAAGA ACAGACCTGA 2640
ATATCACTAT CAGTGGGATT AGAAAGGGAG GCGGATGGGG GGGGGTCTCC CAGAAGAGTT 2700
CTAGGGTTCA GCATCTAAGC AGGGTAGTAG AAGCCTCATC CCTGTGTACA GATCCCAGAG 2760
GACTCAAGGC TATGGGTGAT GTCGAAGGTG CGGAAGAATC AAGTTGGAAA GACCAGCAGG 2820
AGACAGACAG AGTAAGGTAT GGTCAGGCGG GATCATCTGC CAGCTGGAGG TCTCAGGACT 2880
GTGGAAAACC ATGTATTCTA GCAGTATATT CTCTGGCCCA GCCGACCATT ACTATCTTCA 2940
TAACGCTTAT GAAACTGTGC CTTCTCTAAG GCCATTCACA GCTCTCGACT GGGCTATCCT 3000
TCTTTGCCCT CTGTGCATAA TTTCATGCTT ATTTGATCTC CCCAACCTCT GCACTGACCT 3060
GGCTTCTTGT GTTATATCCT AAACAACTTG TTCTTGGTTT CATCCACTCA GTTCTCTGGA 3120
TCAGCCAGCT TCACACAGAA GTGACAGCAC TTCTGAAATC CCCTCTTAGT CACTTTTGTA 3180
ACTTCAACCT CTGCTAAAGG TAGACACTCA CTCTATAGAC CAGGCCTTGA GCTCAAAGAT 3240
CCACCTGCCT CTGCCCCCTG GCCCCCTCCA CCTCCCCACG AGTGCTGGGA CTAAAGGTGT 3300
GAACCACCAC CACCACCACC ACCACCACCC AGCTCCCTTG TTTTCTTAAC ATTGATCTAT 3360
TTATAACTAG AGTGAGCAAA GCAGTGGTGG TGCACAACTT TAATCCCACC ACTCAGGAGG 3420
CAGAGGCAGG TGGAGCTCTG TGATTTCGAG GCCAGCCTGG TCTACAATAT GAGTTCCAGG 3480
ACAGCCAGGG ATACACAGAG AAACCCTGCC TCAAAAAGAA AATCAAATAA ACCCCCACAG 3540
AGTTACACCT TATCCACTGC CCAATGTCCT GCCATTGGTT CCCAGACCAG AGCCTAGAGC 3600
CTGAAATGGT CATATGCTCA GGCCCCATTG CAAAGGACAG TGGGAAGGCA CCTGCTTGTC 3660
TAACCTCTGG GGTGGCAAAG CTCGGGAGGG ACTCCTCCTT AGGCAGCAGA GATGCTCACT 3720
GGTGTGGGCT GTGCACACTC TGGTTTTCTT TCCTCTAAAC TTGTGGGCCC CCAGGTTCAA 3780
GCTTTTAATT TTCAGGTTTG CATATCTATA AGTGCCTCCG TGTATCTATG TGGACCACAT 3840
GTATGCCTGG TGCCTGTGGA AATGAGAAGA AAGCATTGAA TCCCCTCAAA AAGTGTTCTT 3900
AACCCCTTAG CCATCTCTCC AGCCCCAGGT TCAAATCCTG AGCACCGTCT GAACTAGTCC 3960
TGTGTCCAAG ACAGTATCAT CAAACCCTGC CCTTCCCGCC TTGTGCCAGC TCGCGCTTTT 4020
TCTTACATCT GTATGTTGAT GCTTAGCAGG TTCCTTGAAT GCTTGGTTTA TGTGCCTGGC 4080
TGGAGGAGAC ACCCATGGCC TTGCAGAGGG AGCGTTCTGG TGGGAAAGCA GACACAACCC 4140
ACCCTAGGCC CGTGGTTTCC CTGCAAGAAG CCCAGTGGCT TTCTGGAGGA CACTTTTCCT 4200
GGAGGAAGTG ACTCAAGGTA TTCAGGGGGT TGGGTAGGGG AAATATCAAG GAAGTAAGAA 4260
AGAACATGGT ATATGTGGGG ACTTGCCTGA CCCTCCAAAG AAGTGGAGCC TTAGATGCTG 4320
AAGCAGAGAA ACTGGCTTAA TGGCCTGGGG TTTAAGGAAG TCAGCCATGA GTTAGCTCAG 4380
AGATGCTAGG ACGTGGCACC CGGCTGGGTG GTGCTTCGTA ATGTGTAGGA GGCTCACGTG 4440
TATGCAACCT ACTGGCTTCT CACATTAGAA GCAAAAAGGT TTGAAGAAGT TAAGTACTGC 4500
AAGGCCAATT GGTACTAGAA TGGAGACAGA GAGGAAGTTC TACTTAGAAA CTTTCTAGAA 4560
GAAGAAAGGG GATAATGAGA GCAAGGAGAG AGATCCAGGG CTTAGTCTGA GGGGATTCTG 4620
TGAGAGCAAC TGAGGTAGGG AGAAGAGCCG TGTGCGTGCT GGTCCCGAGG CTGCAATGTA 4680
AGCAACATGC CAAGCTTTAC ACAAAGGCTT CTCTGTAAGA GGCCTTGGCA GTGGCTGTCA 4740
GGTGAGGGGA CTTAGCTCTC AGGGCCTTCA GGGCATTGGG GGTAGGGCTG GAGGTGGCCT 4800
CAGACTTCCA GCAGGTCCAC ATCAAAAGAA AGACTCTAAG CCTGGCTAGA ACTCCCACAG 4860
AGGCTATATA GAGCTGGTTC CAGGCCAGGC TCCTGCCCAC TGCCCAGTCA GGCCGCCAGG 4920
TCTAGGCTCA GCCTCTGCCC ACCTCCTATT CTTCCAGCTG TGCCCCCTGC ACCTTCTAGC 4980
ATCTCCTTTT TCAGCCCACA CATGCCCTCC CAGGTTATGG GTCTGGTCTC ACTGGGCCCG 5040
AGCAAGTACC ACAGGGAACC TCTTACACTG AGGACTGTAT TGGGAAGGAG AGAAACCACT 5100
GACCAGAAGC AAAAAGGTGT CTCGGGAGGA AGGGGGTCAC TGTTTCAAGC ACTCTGCTCT 5160
CCATCTTCTT CAGCACAAGT TCTTGGTGGC CTCAATTCAC GGTCTCTTCC TGTTGATCAG 5220
CAGTGGGCAG AGACCACCTC CCTCATTGCC GCTTTGGGTT TGGACCGCTT TAAACAGTAA 5280
AGTGACTGTC GACGGCTCAG TCTACAGGGA GGAGAACAAA AGACAGGGTC AGGGCTGGGC 5340
AGACTGGACA GGGTAAGATT CTGGCTCCCC TCACTTGCTA GTTGGAGGAG TGGGGAGGCG 5400
AGTTATTAGT GCCTTTGGGC CCTGACCTTA TAGCCCTTCG TAGGGTGGTG TGCGAATGTC 5460
CAGTGTCCAG TGCTGAATGC TGAGGGACCC AGTAAGAGGA GGTGGCTAGA ACTGGAGGGA 5520
CAGTTTCCCA GAAGCCTGGG CTTTGGGATA GCAGCTGGGG AGAGCAGAGT CACGCTAGGC 5580
TCTTGTCTAG TGACTGGAGC TGTCTGGGTC TCAGGTCTAA GGTCTTATAG GGCATCTGGT 5640
TGGTATTAGT GCTACATTCT GCTGAGGCTA TCGCCCACAT TGCCTGCAGC TGACCATGTT 5700
CCTTCCCTCT CTCCCTTTTC TCCAGAGCAG CATAAGCCAG GCTCTATGGA ATGTTGGGTG 5760
AGCTGCTTGA GGAACTCCAA GGCCTGTCCC ACAGTCTTCC AGCCTCCGAC TCTCCGGCCC 5820
TCAGCGAGGT CAGCAGTGAG CTACTTTTGG ATCTGTTGGG ATCCCTGAGC CCGTGGTCCA 5880
GGGAGACTCT GAACAGGGAG ATCTTTTGTC ATGACATGGT TGTCTCTTGT TGTGCAAGCA 5940
AGAGTCAGGG GACAAATGAC ATTGGCTTTA GCCCCCTGCC AGCAGTACCA GGGCCTCCAG 6000
GACGGGAGGG AAGGACCAGG CTGAGGCTGG CATATGGGAG AGAGCGTGTG TGCGCTGGCG 6060
TTTCACCTGC TAGGGCTGCC TTCTGCTGGG CTGTCCATCT GGCACCAGCT GGCATACCAG 6120
CTCCGCCCCC ACAGCCAACC AGACTCCTTC GGCTGTTGCT ATGACAATTG GCTGCCATCT 6180
TGGTACTCAG GGCACTACCG TCTCTCTGAC TTTTCCTGTG GGGCTCCTGA GGGACAGAAA 6240
ACAGATCCTC AATTTTTCAT ATCAGAGCCA GGCAGTAGTG GCACACACCT 6290