Tag | Content |
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EnhancerAtlas ID | MM059-05292 |
Organism | Mus musculus |
Tissue/cell | Forebrain_E11.5 |
Coordinate | chr3:88024140-88030430 |
Target genes | Number: 16 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
POU1F1 | MA0784.1 | chr3:88026244-88026258 | CTTATTTGCATATA | - | 6.32 | POU2F1 | MA0785.1 | chr3:88026256-88026268 | TATTTGCATAAT | - | 6.32 | POU2F2 | MA0507.1 | chr3:88026244-88026257 | CTTATTTGCATAT | + | 6.57 | POU3F3 | MA0788.1 | chr3:88026255-88026268 | ATATTTGCATAAT | - | 6.29 | REST | MA0138.2 | chr3:88024946-88024967 | TCCAGCACCACGGACAGCTCC | + | 10.48 | RFX1 | MA0509.2 | chr3:88025748-88025764 | TGTTGCCATAGCAACC | + | 7.18 | RFX1 | MA0509.2 | chr3:88025748-88025764 | TGTTGCCATAGCAACC | - | 7.19 | RFX2 | MA0600.2 | chr3:88025748-88025764 | TGTTGCCATAGCAACC | + | 7.6 | RFX2 | MA0600.2 | chr3:88025748-88025764 | TGTTGCCATAGCAACC | - | 7.7 | RFX3 | MA0798.1 | chr3:88025748-88025764 | TGTTGCCATAGCAACC | - | 7.52 | RFX3 | MA0798.1 | chr3:88025748-88025764 | TGTTGCCATAGCAACC | + | 7.66 | RFX4 | MA0799.1 | chr3:88025748-88025764 | TGTTGCCATAGCAACC | + | 6.88 | RFX4 | MA0799.1 | chr3:88025748-88025764 | TGTTGCCATAGCAACC | - | 7.12 | RFX5 | MA0510.2 | chr3:88025748-88025764 | TGTTGCCATAGCAACC | - | 7.79 | RFX5 | MA0510.2 | chr3:88025748-88025764 | TGTTGCCATAGCAACC | + | 7.87 | RREB1 | MA0073.1 | chr3:88025760-88025780 | AACCACCCCAACCCCCAACC | + | 6.09 | STAT1 | MA0137.3 | chr3:88026099-88026110 | TTTCCCAGAAA | - | 6.02 | STAT3 | MA0144.2 | chr3:88026099-88026110 | TTTCCCAGAAA | - | 6.32 | STAT3 | MA0144.2 | chr3:88029663-88029674 | TTTCCCAGAAG | - | 6.62 | TBX21 | MA0690.1 | chr3:88027433-88027443 | AAGGTGTGAA | + | 6.02 | YY1 | MA0095.2 | chr3:88030310-88030322 | GCTGCCATCTTG | - | 6.32 | ZBTB18 | MA0698.1 | chr3:88024410-88024423 | CATACAGATGTTT | + | 6.01 | ZNF263 | MA0528.1 | chr3:88026391-88026412 | GAGGCAGGAAGAGGATGGAAA | + | 6.01 |
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| Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
mSE_03757 | chr3:88023080-88026113 | Cerebellum | mSE_03757 | chr3:88028403-88031216 | Cerebellum | mSE_04018 | chr3:88022088-88027145 | Cortex | mSE_04018 | chr3:88027586-88030432 | Cortex | mSE_04384 | chr3:88016859-88031229 | E14.5_Brain | mSE_10788 | chr3:88024578-88027221 | Olfactory_bulb |
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Enhancer Sequence | GACCCTCTGG TTGAGGGGAG TCGCATACCC GCAGGTCGTG GCACCCATGC TCTGTGACCA 60 TGCAAGGGTA CCCTGTGGGG ACACTGCACA TCATTGTCTT GTCTGGGGTG AGTTTCCACA 120 GCCCAGAAGA GGCAAGCCTG ACACCAGACT AAGCCTCTCT TCCCTGTCCT TCCCTTCCTC 180 CAGCAGTTCA AGCACCTCTT CTTATCCACA TACATCCTGC GGAGCCAGTG CTTCTAGGCT 240 TGGTTACACA CCAAAGCCGC CCTTCACCCC CATACAGATG TTTGGGCTTG GCCCAGCCCC 300 CAAAAAAACT CAGAGAGGAA ATGAAGCTTT GGAGTCTGTA CCAACAGATA CACTCTCCTG 360 TCTGTGCTCA GGACAACAAT CTCACCTTCC CAAGTCCCTG ATCTATCTAT AATGCCCTTG 420 TTCATCTTTA TTACTAAATT ACTTGAAGAG CCCTTAGTAT TTAGAATGGA ATTTAAAGGT 480 CCATCTTTGA CCTCAGTCTT GCTCTTCCCT AAGGCCAAAA GCACTGGCTC AGGCTCACAG 540 GAGCCTGTGG CTTTTCCAAA TGGATCCAGT GGAGAGCTGA GCTCATCTGA GTCCCCTGAA 600 CATCCTGGGA CTAAGGGTGG GGAGTGCAGG ATTCATAGAC TCCAGCACCC TCCCTTCCAG 660 GAGCAGGAGA CTTCCTTCAA AATCCTCTTT TCCCTTTCCT TACTGTATCC AAATGTTTCT 720 GCTTCTCTTC CCTCCAGCTT CTCCCCTGGG GGCGGGTGGG TGCTCCACCC TCCCGCCCAC 780 TCTCTGAGGA CATGAGGAAC ATGGTATCCA GCACCACGGA CAGCTCCCAG CGGTGAGTGA 840 GCCTGCTGAC CCCTGTAGGA AAATGGTGGT TTTGTCTATT CCAGGCAGAC ATCCTGCACT 900 ACATTCCAGA TCTGATGAGG CATGGCTGCC CCAGGATTAC TGGGCTCGGA CGGGAGCAGT 960 GGTAGGAAGG ATCCTATATA AGTCATGTGA GACATAGAAT GTTCAGATCA ACTGAAGCTG 1020 AAACAAGCCT TTGGCATCAT ATATAACCCA GAAAGGGACA AAGCTGGTGA GTGAACTCCT 1080 GAATCCAGCC TAGCCTTTTC TGCACTGATT CCCCTTTATG AACCTCCTTG CCCAATTCTG 1140 GCAGGAGATT TACATGAGAT GTTACACACA AAAGGGCAGG ATACATGTCT GGGAATGTGA 1200 AGTATCCCTA AGAACCAGGG AAAGGTGGAA CTGACTGCTC TCACCGTCTG AGAAGGCTTT 1260 GAAGGGAAAG TCCTGAAGAA GGCATGGGGA AGGCTTACCT AGCAAAAAGG CAAGGGAGCC 1320 ACCATCTGCC AGGGTATAGA GGCCAGTGGA TGGCCCCAGG AGTCTCTGGA GGCCAGCAGG 1380 AGGCATGCAG ACTGGACTGG GGCCTGGGAA AGGCCCTTCT GTGTGCCCAC GCTTGCTCCC 1440 CCTACACCAT GAGTCTAGAG ACAAAGGGAC CACTCTCTCA CATTTGACAC TGCCATCTCC 1500 GGCTGGCAGT GCCAGGTGGC AGGGGCATCA GGGGTGTCAA TCCATTATCC ACTCCCAGCC 1560 CCTAAGTCCT CTGGGGCTGA ATGTTGGGGA GGTGGGTGTT CTACGCTATG TTGCCATAGC 1620 AACCACCCCA ACCCCCAACC CCAAAGCACA CAAAAAGATA GCTCTCACCC CCACCTCTAG 1680 GAGAAACCTG GGTCTGCCTG GGAATCTTCC CTTGAGAATC CTCCTCTCTA ATGCACAGCC 1740 ATGCCATTCT TGTGTCTGCA CCATCCTCAG TACCCGGCGC CAAAGACCCA TAGGGCAGTG 1800 AGACTGGTAC GTTCAGTATT CAGGCATGTA GAGGGGGCAT CCATCCCTTC TAGTTAACCC 1860 CTCTCTCCTC AAGCACTCAC GTCCTTCACT ACAGCCAACG CCATCCTAGG ACTCCCCAAC 1920 TGAAGCAGTG GGCTATGTTG GGACCCCGGC CTTCTGCTTT TTCCCAGAAA TAGACACCTG 1980 CTACCTTTAG CAAACCTCCA GGCTGTGGGA ACTGCAAGGA GGAGGGAGCC ATTCCTGACA 2040 CCCTCCATCT GTACCCTCGC CATTACTCAT TAGGCATTCT GCCCCCTCCT TCCGCTCGTT 2100 AAGCCTTATT TGCATATATT TGCATAATAC AGTTCATTTG CATTGCAGGA GGCTCATGGT 2160 AGAAGCCAGG AAAAAAAAGA GGTGGGGGGG TGGAGAAGAG AAAAAGGGAG AGATTTTGTT 2220 TTCATCAAAG TGTGGGGGGA GAGCTGGGGG GGAGGCAGGA AGAGGATGGA AATAAAACTC 2280 ATACTACTTT CTTTCTTCCC TCCGCCCTCT CTCCCCGAGT TGGACTGAAA TGCCAAAGAG 2340 AGGTGCCAAG GGTCTGCCTT TTCTGTCCTT TTTTTTGTCT TGCTTCCTCC GGCCTTGGCT 2400 CTTCAGTCAG GGGGCCCCCC ACCTTGTTGG AATCAGGCTT CAGAAAGAAA GCTGGGTAGG 2460 ATGTGAGGCT GTGAGAATGG AAACATAGGA AGGGAAGAGG GAAGCCGCCA TCTTAGGTAG 2520 CTAGTGTTTA TAAAATGGCC GCTTCTGAGA GATGTGGGCT GAGTGCCAGG CAGGGTGGTG 2580 GGCACGAAGG AGAATGACAA CAGAAGGAAG GGTTTCCCAG CTGACCAAGA ACAGACCTGA 2640 ATATCACTAT CAGTGGGATT AGAAAGGGAG GCGGATGGGG GGGGGTCTCC CAGAAGAGTT 2700 CTAGGGTTCA GCATCTAAGC AGGGTAGTAG AAGCCTCATC CCTGTGTACA GATCCCAGAG 2760 GACTCAAGGC TATGGGTGAT GTCGAAGGTG CGGAAGAATC AAGTTGGAAA GACCAGCAGG 2820 AGACAGACAG AGTAAGGTAT GGTCAGGCGG GATCATCTGC CAGCTGGAGG TCTCAGGACT 2880 GTGGAAAACC ATGTATTCTA GCAGTATATT CTCTGGCCCA GCCGACCATT ACTATCTTCA 2940 TAACGCTTAT GAAACTGTGC CTTCTCTAAG GCCATTCACA GCTCTCGACT GGGCTATCCT 3000 TCTTTGCCCT CTGTGCATAA TTTCATGCTT ATTTGATCTC CCCAACCTCT GCACTGACCT 3060 GGCTTCTTGT GTTATATCCT AAACAACTTG TTCTTGGTTT CATCCACTCA GTTCTCTGGA 3120 TCAGCCAGCT TCACACAGAA GTGACAGCAC TTCTGAAATC CCCTCTTAGT CACTTTTGTA 3180 ACTTCAACCT CTGCTAAAGG TAGACACTCA CTCTATAGAC CAGGCCTTGA GCTCAAAGAT 3240 CCACCTGCCT CTGCCCCCTG GCCCCCTCCA CCTCCCCACG AGTGCTGGGA CTAAAGGTGT 3300 GAACCACCAC CACCACCACC ACCACCACCC AGCTCCCTTG TTTTCTTAAC ATTGATCTAT 3360 TTATAACTAG AGTGAGCAAA GCAGTGGTGG TGCACAACTT TAATCCCACC ACTCAGGAGG 3420 CAGAGGCAGG TGGAGCTCTG TGATTTCGAG GCCAGCCTGG TCTACAATAT GAGTTCCAGG 3480 ACAGCCAGGG ATACACAGAG AAACCCTGCC TCAAAAAGAA AATCAAATAA ACCCCCACAG 3540 AGTTACACCT TATCCACTGC CCAATGTCCT GCCATTGGTT CCCAGACCAG AGCCTAGAGC 3600 CTGAAATGGT CATATGCTCA GGCCCCATTG CAAAGGACAG TGGGAAGGCA CCTGCTTGTC 3660 TAACCTCTGG GGTGGCAAAG CTCGGGAGGG ACTCCTCCTT AGGCAGCAGA GATGCTCACT 3720 GGTGTGGGCT GTGCACACTC TGGTTTTCTT TCCTCTAAAC TTGTGGGCCC CCAGGTTCAA 3780 GCTTTTAATT TTCAGGTTTG CATATCTATA AGTGCCTCCG TGTATCTATG TGGACCACAT 3840 GTATGCCTGG TGCCTGTGGA AATGAGAAGA AAGCATTGAA TCCCCTCAAA AAGTGTTCTT 3900 AACCCCTTAG CCATCTCTCC AGCCCCAGGT TCAAATCCTG AGCACCGTCT GAACTAGTCC 3960 TGTGTCCAAG ACAGTATCAT CAAACCCTGC CCTTCCCGCC TTGTGCCAGC TCGCGCTTTT 4020 TCTTACATCT GTATGTTGAT GCTTAGCAGG TTCCTTGAAT GCTTGGTTTA TGTGCCTGGC 4080 TGGAGGAGAC ACCCATGGCC TTGCAGAGGG AGCGTTCTGG TGGGAAAGCA GACACAACCC 4140 ACCCTAGGCC CGTGGTTTCC CTGCAAGAAG CCCAGTGGCT TTCTGGAGGA CACTTTTCCT 4200 GGAGGAAGTG ACTCAAGGTA TTCAGGGGGT TGGGTAGGGG AAATATCAAG GAAGTAAGAA 4260 AGAACATGGT ATATGTGGGG ACTTGCCTGA CCCTCCAAAG AAGTGGAGCC TTAGATGCTG 4320 AAGCAGAGAA ACTGGCTTAA TGGCCTGGGG TTTAAGGAAG TCAGCCATGA GTTAGCTCAG 4380 AGATGCTAGG ACGTGGCACC CGGCTGGGTG GTGCTTCGTA ATGTGTAGGA GGCTCACGTG 4440 TATGCAACCT ACTGGCTTCT CACATTAGAA GCAAAAAGGT TTGAAGAAGT TAAGTACTGC 4500 AAGGCCAATT GGTACTAGAA TGGAGACAGA GAGGAAGTTC TACTTAGAAA CTTTCTAGAA 4560 GAAGAAAGGG GATAATGAGA GCAAGGAGAG AGATCCAGGG CTTAGTCTGA GGGGATTCTG 4620 TGAGAGCAAC TGAGGTAGGG AGAAGAGCCG TGTGCGTGCT GGTCCCGAGG CTGCAATGTA 4680 AGCAACATGC CAAGCTTTAC ACAAAGGCTT CTCTGTAAGA GGCCTTGGCA GTGGCTGTCA 4740 GGTGAGGGGA CTTAGCTCTC AGGGCCTTCA GGGCATTGGG GGTAGGGCTG GAGGTGGCCT 4800 CAGACTTCCA GCAGGTCCAC ATCAAAAGAA AGACTCTAAG CCTGGCTAGA ACTCCCACAG 4860 AGGCTATATA GAGCTGGTTC CAGGCCAGGC TCCTGCCCAC TGCCCAGTCA GGCCGCCAGG 4920 TCTAGGCTCA GCCTCTGCCC ACCTCCTATT CTTCCAGCTG TGCCCCCTGC ACCTTCTAGC 4980 ATCTCCTTTT TCAGCCCACA CATGCCCTCC CAGGTTATGG GTCTGGTCTC ACTGGGCCCG 5040 AGCAAGTACC ACAGGGAACC TCTTACACTG AGGACTGTAT TGGGAAGGAG AGAAACCACT 5100 GACCAGAAGC AAAAAGGTGT CTCGGGAGGA AGGGGGTCAC TGTTTCAAGC ACTCTGCTCT 5160 CCATCTTCTT CAGCACAAGT TCTTGGTGGC CTCAATTCAC GGTCTCTTCC TGTTGATCAG 5220 CAGTGGGCAG AGACCACCTC CCTCATTGCC GCTTTGGGTT TGGACCGCTT TAAACAGTAA 5280 AGTGACTGTC GACGGCTCAG TCTACAGGGA GGAGAACAAA AGACAGGGTC AGGGCTGGGC 5340 AGACTGGACA GGGTAAGATT CTGGCTCCCC TCACTTGCTA GTTGGAGGAG TGGGGAGGCG 5400 AGTTATTAGT GCCTTTGGGC CCTGACCTTA TAGCCCTTCG TAGGGTGGTG TGCGAATGTC 5460 CAGTGTCCAG TGCTGAATGC TGAGGGACCC AGTAAGAGGA GGTGGCTAGA ACTGGAGGGA 5520 CAGTTTCCCA GAAGCCTGGG CTTTGGGATA GCAGCTGGGG AGAGCAGAGT CACGCTAGGC 5580 TCTTGTCTAG TGACTGGAGC TGTCTGGGTC TCAGGTCTAA GGTCTTATAG GGCATCTGGT 5640 TGGTATTAGT GCTACATTCT GCTGAGGCTA TCGCCCACAT TGCCTGCAGC TGACCATGTT 5700 CCTTCCCTCT CTCCCTTTTC TCCAGAGCAG CATAAGCCAG GCTCTATGGA ATGTTGGGTG 5760 AGCTGCTTGA GGAACTCCAA GGCCTGTCCC ACAGTCTTCC AGCCTCCGAC TCTCCGGCCC 5820 TCAGCGAGGT CAGCAGTGAG CTACTTTTGG ATCTGTTGGG ATCCCTGAGC CCGTGGTCCA 5880 GGGAGACTCT GAACAGGGAG ATCTTTTGTC ATGACATGGT TGTCTCTTGT TGTGCAAGCA 5940 AGAGTCAGGG GACAAATGAC ATTGGCTTTA GCCCCCTGCC AGCAGTACCA GGGCCTCCAG 6000 GACGGGAGGG AAGGACCAGG CTGAGGCTGG CATATGGGAG AGAGCGTGTG TGCGCTGGCG 6060 TTTCACCTGC TAGGGCTGCC TTCTGCTGGG CTGTCCATCT GGCACCAGCT GGCATACCAG 6120 CTCCGCCCCC ACAGCCAACC AGACTCCTTC GGCTGTTGCT ATGACAATTG GCTGCCATCT 6180 TGGTACTCAG GGCACTACCG TCTCTCTGAC TTTTCCTGTG GGGCTCCTGA GGGACAGAAA 6240 ACAGATCCTC AATTTTTCAT ATCAGAGCCA GGCAGTAGTG GCACACACCT 6290
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