EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM059-04478

Organism

Mus musculus

Tissue/cell

Forebrain_E11.5

Coordinate

chr2:32292210-32293590

Target genes

Number: 21
Name	Ensembl ID

Prrc2b	ENSMUSG00000039262
Uck1	ENSMUSG00000002550
Gm13611	ENSMUSG00000066068
Golga2	ENSMUSG00000002546
Swi5	ENSMUSG00000044627
Ciz1	ENSMUSG00000039205
Dnm1	ENSMUSG00000026825
1110008P14Rik	ENSMUSG00000039195
Ptges2	ENSMUSG00000026820
Gm13413	ENSMUSG00000083004
Naif1	ENSMUSG00000039164
Slc25a25	ENSMUSG00000026819
Fam102a	ENSMUSG00000039157
Dpm2	ENSMUSG00000026810
Pip5kl1	ENSMUSG00000046854
9430097D07Rik	ENSMUSG00000075405
St6galnac4	ENSMUSG00000079442
Ak1	ENSMUSG00000026817
Eng	ENSMUSG00000026814
Fpgs	ENSMUSG00000009566
Sh2d3c	ENSMUSG00000059013

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PBX1	MA0070.1	chr2:32292352-32292364	ACATCAATCATA	+	6.11
TBX21	MA0690.1	chr2:32292640-32292650	TTCACACCTT	-	6.02
TBX2	MA0688.1	chr2:32292639-32292650	ATTCACACCTT	-	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_08445

chr2:32292396-32293727

Liver

Enhancer Sequence

TCCTCTTGCT ATAGAAGCTG AATTTATAGA ACTTTGTCAA CAGGCCCATC TCTGATTCGA 60
GATTCTTATG TGCAAAATGA GACAGTAATA GAACATTTTT TGTTACTTTG GGCCAGTCTA 120
GAGCCAAGGC CCCTAAATAA ACACATCAAT CATATATCAT ACACACACAC ACACACACAC 180
ACACACAGTA CTGGGGACTG AATTCAGGGC AAAGGCACAT CCTTAGCCTA ACAAGTCAAT 240
CCTTTCATAA ACCTGAACAC TGTTTAGGCA CAGAGAGGCT GAAGAAATGA AGGAGAAAGT 300
GCTGTCTGGG GTTCCCACTA CAAAACCCAC TTATGTAGGT GTTGGCTGTA ATTGAATAGA 360
TTTCTCCATA CCACGGAGCT GAGTTACAAA CACTAGGGCT TCCAGCCAGG ATAGAGTATC 420
AAGGAACTGA TTCACACCTT CCTGTGTGTA GCTAGAAAAA ACTCAGAACA CATGAAGTAA 480
TGTTTTCAAG CCACTGAACA GGCACAAAGG GCACCACTTC CTGAGGAATG TGTATGGATG 540
AGGCAATTCC CAGCACTGCC ATAGCTTCCT GCCGCAAGTT CCCAGGCTCT CATGAAGAGG 600
AAGAGCTTGA ACAGAGCTGG GCAACCTCCC AGTCTGCAAG AGATGAGGCT GCTTCTAGGG 660
CAGTCTGAGT ATTCAGAGCA GGGTACCAAA GAGGAGACAG TTGCAGAGCT GCAGAATGTC 720
CCCTAGGAAT CACAACACAC CGCTGAGTTC AGAGATGGTC CTGACCAGGA GGAAACCTAC 780
CACACAGAGT TTAGGGAATA GCACTCATGG GGGTCTGGCT TCATTCATGG GCAAAGTCAG 840
ACTGTACCTA TCAAAGTAAG CCCTCTGATA TTCAATAATC TGGGTGTTTC AAATAAGCAC 900
ACCCAGACTA ACACTCAAGA GTATTTATAG GAATACAAAG TTAGCTGGCA TTCAATGGGG 960
TAAAATCCAG AGCCAGGCCT TCTTGGCTAT AGTTTCAGTT ACTCAGTGGC TGAAGTAGGA 1020
AGATCAAACA TTCAAGAACA GACTCAGTGA CCTTAGCTTT CACTGTAAGT CAGGAAAGGG 1080
CAAACCAAAC ACAAAGGAAT AAATTAGGCC AGGAAGCCAC AACTCTCTCC CTTGCACAGA 1140
CTAGGATCAT GGAGCTGTGG TTTACCGAGT GCTCTGTGTT AAACGCTTCC ATCTCTGCTG 1200
CATATCTCTC ATTTCTTATG CCACAGCATC TAAATCAGAG CTCTGGGGAG ATCACTGGTT 1260
TCCTGTGGGT GACTTATCAA TTACAACTCT AAGTCTGCTC CCTCAGCTTC TTGGGTATGA 1320
GGCCCATCCA CCTCCAGAGC AGGGCTGGCA CAGTTAGTTT CCTATACCTG CCACCTGGGC 1380