EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM059-00234

Organism

Mus musculus

Tissue/cell

Forebrain_E11.5

Coordinate

chr1:134183890-134185200

Target genes

Number: 9
Name	Ensembl ID

Slc45a3	ENSMUSG00000026435
Lemd1	ENSMUSG00000079330
Klhdc8a	ENSMUSG00000042115
Nuak2	ENSMUSG00000009772
Tmcc2	ENSMUSG00000042066
Dstyk	ENSMUSG00000042046
Rbbp5	ENSMUSG00000026439
Tmem81	ENSMUSG00000048174
Cntn2	ENSMUSG00000053024

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GLIS2	MA0736.1	chr1:134184956-134184970	GACCCCACGCGATG	+	6.01
POU2F2	MA0507.1	chr1:134185059-134185072	AAATGCAAATTAA	-	6.25

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_09953	chr1:134183026-134186140	MEF
mSE_10237	chr1:134183954-134185513	Embryonic_stem_cells

Enhancer Sequence

ATTTCTCTTG GTGCCCTGAA TATTGGTGGT AGTTATTACT GTGAGAGGCT GTTATCATAC 60
ATGTTTACCA GTCATAGGGC ACATCCCATG GAAGCCCAGG AAAGATTACT CTTGTCTGTA 120
GGGGTCTAAC CAGCCTGGAG CCAGTGGTAT TCAGGCTGAG CACTAAAGGG TGCAAGAGGT 180
TTTAACAAGC AGGGATGAGC ATGTAAGGCC CAGCGCACAG CTATGAAATG GAAAGGTCTT 240
AGCTATCAGC AGTAAGGCTG GCAGGGAGCT CAGCTGCCTT TGGGCTTATG TCATTTGGGA 300
GCCCTGCTCT TGAAGGTCAG GGCCAGCCAG TTTCAGCCCC CAGGGACAAG GGGGAGTGTG 360
ACAATCAAGA GAGAGCCAGA ATGGGAGCCC AAGACCAGAG TTGGCTCCTG GCTGAGTGTC 420
ACATAGAACT TGGTGTCACA AGGTTCATCT CCCCCATCTC TGTCTTCCCC CTTCTTCCTT 480
TCGAATGGGG AGTAATAAGA CCCCACTCAC CTCCCACCTG TGCTGTAATT ATCAAACGCA 540
GCACACGGAC TAAAATGCAA AGTACTGCTC TTCAAGACCA AGAAGGGTTA GTGTGGCCTC 600
TCAAAAAGCT CTGGGGGAAA ACACAGAGGC AAAGGGCATT TGAAAGGAAG ACTCAAACCC 660
CTGGGAACAG CGCCTGACTC CTAGCAGAAG TGGGCCAGTA ACCGCCCTCA TAACTTATTA 720
ATTCACTTTA TTCATTCATG CAGCAAATAT TCCTTCTGTG CCCTCTAAAT GCCAGGCTTG 780
GGACTCCATA TTGGGCAAGT GGTGAAAGAG ATGGATGGAG ACCCTGCGCT GAGTTATCTT 840
TAAGCAATTT GAAAAATTGG CAGCCTGAAG GCTTCTGCAC CACTGGCCAC CTTCCAGTTT 900
TTCTCCAGGA TTGGTGCGAT TCATTCTGAA TTGAGCCAGG CTACCAAGAC CTCCTCCCAG 960
CATACGCGAA CACCCACCCC TCTGCCCTCT GCTGACGGGC TCTGCCATCA GCAGCTCCAT 1020
CCAAAGGCTT CGCTCAGACA TCCCACGCAT CCCTGGAACC TTCCCTGACC CCACGCGATG 1080
AACGGAAGTG CCTTAATATT TAAAGAGGAA TGAATTTTCT AATTAGCACC CAAACACTGG 1140
AGCCTGGCCC TTCCTGACCT TACCTATTTA AATGCAAATT AATCTTCCCC GAGGAAAGCG 1200
GATAAGTGAA GGAAACCTCA AAGGGTAGAG AAGCAGGCAG GAGGCCAGGG GTGCTGATCA 1260
GAGCTGTCAC TTTTGTCCCT GCTACTGACT TTGCTGCCTG GCACCCACAC 1310