EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM059-00130

Organism

Mus musculus

Tissue/cell

Forebrain_E11.5

Coordinate

chr1:75543490-75543780

Target genes

Number: 8
Name	Ensembl ID

Stk16	ENSMUSG00000026201
Dnpep	ENSMUSG00000026209
Gmppa	ENSMUSG00000033021
Tmem198	ENSMUSG00000051703
Obsl1	ENSMUSG00000026211
Stk11ip	ENSMUSG00000026213
Slc4a3	ENSMUSG00000006576
Gm5257	ENSMUSG00000082012

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA(var.2)	MA0730.1	chr1:75543547-75543564	TGTCCTCTGGATGACCC	-	6.45
RREB1	MA0073.1	chr1:75543505-75543525	GCGTGGGGGTGGGGTGGGGG	-	6.29
RREB1	MA0073.1	chr1:75543504-75543524	TGCGTGGGGGTGGGGTGGGG	-	6.92
Rarb(var.2)	MA0858.1	chr1:75543547-75543564	TGTCCTCTGGATGACCC	-	6.02
ZNF263	MA0528.1	chr1:75543523-75543544	GGAGGAGGGGCAGGATGGGCG	+	6.25
ZNF263	MA0528.1	chr1:75543520-75543541	GGGGGAGGAGGGGCAGGATGG	+	7.26

Enhancer Sequence

CCCCAGGTGA CTGATGCGTG GGGGTGGGGT GGGGGAGGAG GGGCAGGATG GGCGGGGTGT 60
CCTCTGGATG ACCCTGGGAC CACCAGATCC AGATGTAGAG CTGTATTGGT AGTGTAGAGG 120
AATAGGGGGT CTTCGGTATT TCATGCACTT GTGGCTGGTG CTCCCACAAC CTGGGGGGAA 180
GCCCTCAGAG GGTGTTTTGG GGATGTTGAT GCAGGCAAGG GTGAAGGTGT TGGGAAGGCC 240
CTTGAAGTAT GGAGTTGGGG TTGGGTGGGG AGTGTTCATG AACTAGGGGT 290