EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM059-00109

Organism

Mus musculus

Tissue/cell

Forebrain_E11.5

Coordinate

chr1:74148960-74151790

Target genes

Number: 4
Name	Ensembl ID

Tns1	ENSMUSG00000055322
Cxcr2	ENSMUSG00000026180
Arpc2	ENSMUSG00000006304
Aamp	ENSMUSG00000006299

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr1:74150667-74150685	GGGAGCAAGGAAGGAGGG	+	6.88
EWSR1-FLI1	MA0149.1	chr1:74151150-74151168	GGACAGAAGGAAGGAAAG	+	7.24
Foxo1	MA0480.1	chr1:74149685-74149696	AGTAAACAGGA	-	6.32
NFIA	MA0670.1	chr1:74149545-74149555	ACTTGGCACC	-	6.02
TBR1	MA0802.1	chr1:74149097-74149107	TTTCACACCT	-	6.02
TBX20	MA0689.1	chr1:74149097-74149108	TTTCACACCTA	-	6.14
TBX2	MA0688.1	chr1:74149097-74149108	TTTCACACCTA	-	6.32
ZNF263	MA0528.1	chr1:74150676-74150697	GAAGGAGGGTGGTGGAAGGGG	+	6.12
ZNF263	MA0528.1	chr1:74150412-74150433	GGGGGAGGAGTGGGAGTGGGG	+	6.76
ZNF263	MA0528.1	chr1:74150904-74150925	GGAGGAGGGAAAGATGGGGGG	+	7.74

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_11501

chr1:74148148-74151761

Placenta

Enhancer Sequence

CCTGGGACAG CCGTGGGAGG AGGGTCTACC TGGCAGCCCA GCACAGAGTC TCCTCTGTTG 60
GTTTTGTCTT CCAGGACAAA GGCAACTCCT GTTAGAGGAG AGTCCCGGAG CATTTGATCT 120
CAGGCTCCCA GACTCTCTTT CACACCTAGA AAGAGGTGTG CAGGCATGGT TCCCTGGGGA 180
CCTCCCAACG CTTCCCCAGG AAGGGCTTGG ATCCAGTAAT TCCCCTTTTC TCCCTACTCG 240
CCACCTGCTC ACAAGAGCCA GTGTCCCTAC CCTCTCTTGT GATGCCCCAA GGGCCCCAGG 300
AGGTTTGCAG TCAAATTCTC CCACCCTCAG GTTGGGCTCC AGGTCCTTCT GCTCCCCCAG 360
GGTCTACTCA ACTGTACTCA CAAGATCAAC CACCCAACCA GGCCCAAGGC ATAGAACTCA 420
CACCCAGCCC CAGGCCACTC TGCCTACAAC AGAACAGACT CCTGCAGAGT AGACCTGACT 480
CACAGGGACT CAAGTGGCAA CAGCTCTAGG CAGCCTCCTC TGGCCAGCCC ACAGGAGTCC 540
TCCTCCAGTT CTTCTGTGGG CACTGATAGC TCATTCCCTC CTTGTACTTG GCACCATTCC 600
TTGTTGATAT ATCTGCTGGC TTCTTCATTC TCCCTTTCTT CCCCACCAGA AGGCCAGCTC 660
TAGAGGCCAC TGTCCACCAC TCTCAGGTGC ACCCTAGTAC CCAGCACAGG ATCCGACAAG 720
GGGACAGTAA ACAGGAGCTC ACTTGAGGGG GGCACAGGGA GAAGAGAGGG AGGGATGAAG 780
GGTGAAACAT CCCTTCCAGA TTCCAGATCC AGGCCATTGG TCACTTTGAG AGTTCTGCTG 840
TCACTGCAGC CAGGCCAATA AGATCTTTAT GTCCCCTCTC TACCCACCCT GACAAGAGAC 900
ACCTTGATCT CTCTTCTGAA CCAGCCCTCT GGTGTCCACT CAAACTTAGA AATGCCCCAC 960
CCCTTCCCTA CCCCTGCTTG TCACAGGACT CTGAGGCCCT GATTGCTTAC ACTGATTTGC 1020
TATACATGGC CAGCAAGTAT CAGTGCCAAA GCTGACAGAG GCCCCTGTTC CTGGTCCATT 1080
GCTTTTCCAT AGCATAACAT GGTAGCCAGA AGGAAAGAGG GCAATATCTG TCCTCCTAGG 1140
GGTGTTCCTT CACCACCGCT AACCCAGGTC TCTGATCTTC TACAGCCCGG AAGTTCCTCC 1200
TGATAGCTAG CCTCCAGTCC CCCTCTCAAA TTCCAAACCG TTTCCTTGAG TCTGCCTTCC 1260
TAGGGAAGAA TAGCTTGGTC ACTCTCTTCC ACACAATAAA TGCCTCCAGA CTGGCAGCAC 1320
AGTATTCAAG CCCCCTCCTC TCCCCACCCC CACCGCTCTC TGTTCCCTGG GCTGAGAATC 1380
CTGGTCCTCT GGGCCCCTTT CCAAATGATT TCCATCACCA CTCAGCGGCC TAGGACATGA 1440
TTAACGGTGG GTGGGGGAGG AGTGGGAGTG GGGACAGGCC AGGCAGGCTA TTGATCCACT 1500
AGGGACCCCC AGGGTGGGGA AGGAAGGGCA AGGGTCCTGA GGTCATCCCG GTCATCCCTT 1560
CTCCCTGGAG TGTTCTTTGC AGGGCCCAGA ATGGAGACTT CAGGCCTGGG AGCTGGGCTG 1620
CTGGGTGGGA GCCCAGGCCC CACAATAAGA TTACAGCAGG GAAGGTCTAA TTGATTCTGA 1680
TGGATCTGAG AAAGGCGGAG ATGAATGGGG AGCAAGGAAG GAGGGTGGTG GAAGGGGACC 1740
CAGAGAGCCG GGCAGGGAAA CCCCTTTTTG CATCAGCACT AGCTAATACA ATCATGGAGT 1800
GCCCTGCCCC CACCTCCACA GCCCCTCCCC TCCTGGGAAG CCAGCCACTG CCACTCCACA 1860
GAGAGGCACA GGAGCAGAAA GCTGACCTAA AGCCTCAAGA CTAGGGACCC AGATGAGAAA 1920
GAAAGGCTGA GACAGACATT CCCTGGAGGA GGGAAAGATG GGGGGCAGTC TGAGGCAGAG 1980
ACAGATCAAC AGGTTCTGCC CACCTCTCCT TAACCATGTC TCTTCACCAT TTCCCTTTCT 2040
CAGGCCAAAA CTGTAGCACA TGGAAACCTA TAAGTGGATC TTATGACTCT CATGCTCCTG 2100
CCTCAGCCTT GGCCTCAGCC TGGAGCCTAC AGATATCTGA GAACATGGGC GGAAGCCAGG 2160
TCACTGGGAC AGACCTCTTC AGGACAGAGA GGACAGAAGG AAGGAAAGGA CCTCCAAGAG 2220
AAAACGCCAA GCTGACTGAG GGAGGGACTA AACAGAACCC CACAGTCTAG AGCAGGGAGA 2280
GGACCAGCAA GTGGAGAGGG GGGCAGAGCA GGGAGGCCTA GCAGGGCCAA GCTGAGGGGC 2340
TGCGAGAAGA CGATTGGCTC CTCCCTTCTA GAAAGAGCAA GGTAGAAAAG GAAGGGACAC 2400
AGGAAGAGGG AGATGGCACA GACCAGCCAC CCAAGGACAC TGAATTGAGA AGCAAGCCAG 2460
ACCTGGCTCC ATCCACTGCC TGCAGAAACA GCCGATCCTG CCGAGATTGC CTTCCCAGGC 2520
TCAGTGCACA GGAAAGAAGT TGCTGCAGCG GGTCCAAGCT CAGGTCTCCA GATTGTTCTA 2580
GCCACCATAG TCCCCAGGGT GGAGAACCTT AGAAGGACCT GGACACGTCC AGAACAGGCT 2640
CTTAGATGGT GTGATGGGGT CAAAAGCCCA CCTAGACATA AGACCTTCCC ACCCCACAGG 2700
TGCAAGGGAT ATGACACCCT GATACCGTGA TTGGTTCTAA ACAGCGATAC CCTTCAAGTC 2760
AAAGCTAGAC ATTCTCCTAC AGACTTACGT CCCTCCTCTC CCCCAGTCTG AGTGGTACAA 2820
TTTGGATTCC 2830