EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM055-04177

Organism

Mus musculus

Tissue/cell

ESC_NPC

Coordinate

chr5:122968290-122968830

Target genes

Number: 11
Name	Ensembl ID

Tctn1	ENSMUSG00000038593
Pptc7	ENSMUSG00000038582
Gm15842	ENSMUSG00000083909
Gpn3	ENSMUSG00000029464
Arpc3	ENSMUSG00000029465
Anapc7	ENSMUSG00000029466
Gm15846	ENSMUSG00000079906
Atp2a2	ENSMUSG00000029467
Ift81	ENSMUSG00000029469
P2rx7	ENSMUSG00000029468
P2rx4	ENSMUSG00000029470

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESR2	MA0258.2	chr5:122968779-122968794	AGGTCACACTGTCCA	+	6.03
RARA(var.2)	MA0730.1	chr5:122968396-122968413	GGGTCAGCCAGAGTTCA	+	6.04

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_04896	chr5:122968752-122970003	E14.5_Heart
mSE_06622	chr5:122968446-122970965	Heart
mSE_07565	chr5:122967647-122970308	Intestine

Enhancer Sequence

CCACAAGTCC CCTTCACATC CTACATCCCT GCAGGGACCC CTTCACATCC TACATCCCTG 60
CCTGCAGGCT CCACCTGCTG TAGCTGAAGC TCTGCGAGGC CTCTCTGGGT CAGCCAGAGT 120
TCACTGGTCT GCATCACGCA CTGCTGTGTG ACATTTGCCC TTCAACCCAG CTTTGTCCCG 180
TGTGGCTGAG GTCAGAAGGT GGCTTCTAAG CCTTTGTTTC CCTGATGCAT AACGGCTGCT 240
TTGCCAGAGA ACGGACTGGG GTGTTGGACA CTGTTGGTGC TGTGTTGGCA TAATGGTGCC 300
GCCGTGAGCT GAGTCATGTT CTGATTCCTG CCCCTCCCCA ACTGACTTTT TTTTTTTTCT 360
TGGCACTTAA CACCCTCCAG TCCCTTCAAC CTCTAAAGCT GGGACAGTCG AGGATGACAA 420
ATGGGCTTTT GAACCCTGAC TCTGCCTAAG GAACTGAGAG ATATTTCTGG TAGCCCATAG 480
AGATTGAGGA GGTCACACTG TCCAATCTTG AGGCTAACAA TTCTAGGTGT AGCAGGCAAG 540