EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM055-03919

Organism

Mus musculus

Tissue/cell

ESC_NPC

Coordinate

chr4:106657800-106659850

Target genes

Number: 8
Name	Ensembl ID

Ssbp3	ENSMUSG00000061887
Gm12786	ENSMUSG00000085581
Mrpl37	ENSMUSG00000028622
Cyb5rl	ENSMUSG00000028621
Tmem59	ENSMUSG00000028618
2210012G02Rik	ENSMUSG00000028619
Lrrc42	ENSMUSG00000028617
Hspb11	ENSMUSG00000063172

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RORA	MA0071.1	chr4:106657811-106657821	TGACCTTGAT	-	6.02
YY1	MA0095.2	chr4:106657835-106657847	CAAGATGGCTGC	+	6.74

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_02579

chr4:106628397-106709222

HFSCs

Enhancer Sequence

TGGACCACAC GTGACCTTGA TCCATTGTGC TGGATCAAGA TGGCTGCCTA CGCTTTCTCT 60
CAGAGATGGC AAAAGGAAGT AAGCTGTGGC CTAGAGAGCC TGACTATCAA GAAATGAGTA 120
CCCCAGGGCT GGCTTTGTGC ACCGAAGGCT CTAGTATAAA CCCTGATGCA TCATTTTATT 180
CAAGAGTATT TGTGGGGCCT CTTGGGCACC AAGCTCAGTG GGACTGGGAG ATGGAGAAGA 240
GCCAGCAGTC ACTCCAGGCA GACAGAATCA CACACAGGGA ATTTCTATAT GACGTGACAG 300
ATGGTTGGAT AGGGTGCCAT GGATGATCAG GGCCAGAGTG ACAAGCTCTG CCTTTCTTTT 360
GTTCTTGAGA TTTTAAACTC CCTTCCCCCA TTCCTGCTGA TTAAGGGAGG TTAGGCTCCT 420
ATTCCCTTCT TGGCCAGTAC ATAGGTAGCT TTTGACTGCA TGGGCTTTAC ACGCCAGACG 480
GGGCAGCTTC CTCTATACTG GTGTGAGACC CAGCTCTACA GACTTCAGAA ACACCCTTTG 540
ACAAAGTAAT TTTAAAGCAG AACCTAAAGG AATTTAAGTT CAGTATTCTT GTCTTGGCAA 600
CTGTAACTTC TCATCTAGTT AACTCCTGTA CCTGTGCACT TAACCATGTG TCAGGTGAGG 660
GCCCAGGGTG ACAGCCATGT CTCTGCACGT CACAGTGTGT GATGTAGAAG AGCCTTCTTG 720
TGGACCTGAG AGCTCAGTGA AATGGGGCGC CGCCCTCCTT TCTGATTGTC CGTGATGCTT 780
GTGCTCCATA GTAGATCCTC AGAACTTCAT TTCACTCTCC CTCCCTCCCA GCCCTGCCAA 840
GTAATTCTCT GCCTGGAGAC TAAGTCCAGG TTGGGAGCTG GCAAGGAGGA GCCTCGGGTT 900
CATCAGGGAG ACCTGGCTAC TGGCTCCAGC TCAGTTCCTT GTTGCCTGTC TGCCTTGGTT 960
CCCTCTGTCT CCCATCTCAG CCACTTGGTT GCCTCCTAGG TCTAAAAGTA AAGGCCCTCC 1020
CACTCCCTGC TCTGGAGTTT CGGAAAGCCC AGCTCTCTGA ACCTAAGCAG CATCCACTCC 1080
AGACACAGGG CAGAGGTGAT GTTTGCAGAG GGAGGGCTGC CTAAGACCTC ACACTTTACA 1140
CTTTCCATGT GAGGCCTTGG ACATTGACTC CAGGGCACAG GCATACGGTT GAGTGCGGTG 1200
TGTCCCTTGC TCCCTCCCGG GTTCTAGCTG AAGATAGGAA GGCCAGAGGC AGAACAGCCG 1260
ACCGGATTCT CAGGCTTTAG AGGAGCGTCC TGGGGCTGTG CTCCCAGCTG CCTCCCATTG 1320
TGCTGGAGCC ACGCGGTACA GCCCCCTCCC CCAGATCTTC CTCTGGAGAA TAAACCATCA 1380
GCAGGATTGA TTACCCTGCA GGTCCCTAGG CCGCTGTCTC TGGCCTGCAT CTGGAGCTGA 1440
TTTCTGTGGC TTGTAGACCC ATTGTCTTGG ATGGCTCATT TCCACAAATC AGAGTTGGCT 1500
CCACTGCCCT AACCCTAGTG TGACCCCAGA TGCATGTTTG TTCGTCCAGT GAACACTTCC 1560
TGCTTGAGGA GGGGGGAAAG GCTGAAGTGC ACATGAGTGG CTCCAGAGCC ACCTCCCTGC 1620
TCTGATGCAG ACAGGATGTT CCTTCCCATC CCAGCCCCTC CCTAGCCTCC CACCTAGGCC 1680
TGCCTTTCTG AAGTAGATTC AAGGAGGATG CATATTTTCA GGAAGTTGGA TCCATCACCT 1740
GGCACCAGAG GGGAGACTCA CAGTCTAATA GCTCCCACAG GGTGTAGTGT TATAAGGCTC 1800
TGTGTCTCCC ACAACAAGGT GGGAGCTACA AGCAGCCCCT GGCATGGGCT AGGAGGTTTG 1860
AACTAAGTCA AAGGCGGCAG CAGCTTATTG GCGAAAGTTT CTAGCACTGT GAGGATCAGT 1920
TGTCAGTGGG GCTTCCTTGC ACACAGAGGG ACTCACTGAG ATGTGTCACT ATGCAGGGGT 1980
CTAGGGGGAC TGGACACATG CTCCATGTTA GCCCCTTTAG CCCCTGCTCT GGGCTGGGGG 2040
ATTTCATGAC 2050