EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM055-01495

Organism

Mus musculus

Tissue/cell

ESC_NPC

Coordinate

chr12:113047460-113047960

Target genes

Number: 15
Name	Ensembl ID

Cdc42bpb	ENSMUSG00000021279
Eif5	ENSMUSG00000021282
2810029C07Rik	ENSMUSG00000091750
Mark3	ENSMUSG00000007411
Ckb	ENSMUSG00000001270
Trmt61a	ENSMUSG00000060950
Bag5	ENSMUSG00000049792
2810002N01Rik	ENSMUSG00000037787
Gm15995	ENSMUSG00000090193
Gm15996	ENSMUSG00000090026
Klc1	ENSMUSG00000021288
Xrcc3	ENSMUSG00000021287
Zfyve21	ENSMUSG00000021286
Ppp1r13b	ENSMUSG00000021285
2010107E04Rik	ENSMUSG00000021290

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESR2	MA0258.2	chr12:113047484-113047499	AGATCAGGCTGACCT	-	6.35
Nkx2-5(var.2)	MA0503.1	chr12:113047841-113047852	AACCACTCAAG	+	6.32

Enhancer Sequence

CTGGCTGTCC TGGACTTGCT TTGTAGATCA GGCTGACCTC AAACTCAGAG TCTGCTTGCC 60
TCTGCCCCCT GAGCACTGCG ATTAAAGGCT TGGGCCACCA CGCCTGGCTC AGCCATGGCT 120
TGTTTTGCAG CTATGACCAT CAGCCCTTAG AGGGCCCAGG CAGAGTCTCC CAGTACCAAA 180
ACCATCCACA CGCTGCTCAA CTACTGGCCA GACCAGAAGG GAAAGGCCTC GTGCTCTGCC 240
CTACCTGTCT GGTTCTGTGA GTCTGGGTGC AGGGGTGTGT AGTAACTGTA GGCCCAGCTA 300
GCACCCCCTG CTTCCCCCTG CCAGCCTAGC ACAGCTCCAC CTCCCACTCA CTCTTCTGGA 360
AGAAGAAAGA CATATAGGGG AAACCACTCA AGAGATAGCC ACTGGCTCCC AGAGAGGAAA 420
GCAGCTCTCA GAGCAGGCCA GGGATCAGCT CTACCTGCCT CAGATCCTGC CTCCCCTCCC 480
TTCAGGAAGG GGAGCCACTT 500