EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM055-01412

Organism

Mus musculus

Tissue/cell

ESC_NPC

Coordinate

chr12:85043550-85044200

Target genes

Number: 5
Name	Ensembl ID

Zfyve1	ENSMUSG00000042628
Gm17284	ENSMUSG00000091015
Rbm25	ENSMUSG00000010608
Psen1	ENSMUSG00000019969
Numb	ENSMUSG00000021224

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NEUROD2	MA0668.1	chr12:85043676-85043686	GCCATATGGT	+	6.02
POU1F1	MA0784.1	chr12:85044171-85044185	TTAATTAGCATAAT	-	7.04
POU2F1	MA0785.1	chr12:85044173-85044185	AATTAGCATAAT	-	6.44
POU3F1	MA0786.1	chr12:85044172-85044184	TAATTAGCATAA	-	6.92
POU3F2	MA0787.1	chr12:85044172-85044184	TAATTAGCATAA	-	6.92
POU3F3	MA0788.1	chr12:85044172-85044185	TAATTAGCATAAT	-	7.52

Enhancer Sequence

GGGGCCTTGT TGAATTGCCC AGACTGGCCT CAATTTCAAG ATCTTCCTGC CTCAACCAGA 60
AAGTATTAGC ATGTACTACT GTACCTCGCT GACAGTCTTT AAGAATGGCT CCATTGTGGA 120
ATAATTGCCA TATGGTTAAC TATACATAGA GGATTCAATG TGATGACTTT TTTTTTTTTT 180
TTAATTTTCA AGATAAGGTT TCTCTGTATA ACAGTCCTAT CTGTCCTGGA ATTCACTCTG 240
TAGACTAGGC TGGCCTCGAA CTCACAGAGA CCCACCTGCC TCCCAAGCAC TGGGATTAAA 300
AGGTGTGCAC CACCACTTCT GGCTCAATGC GATGACTTAT AGCATGCATA AATACTCGTA 360
AAAATCCATA AAATTCTTTG TAGTGAAGAA AAGAGCAGGC CTCATTACCC CCAAGTTGCC 420
CATGTTCCCT TTGTGCTGTC CCCATGCCTT TCCCCACCCC TAGCAACCAC CCTCAGGTCT 480
TTTTGTCACC TCCCTCTGGG GTTACTCTTC CAGAAGTTAT ATAAATAGAG CCATGCTGGG 540
CTGGAGAGAT GGCTCAGCCA TCAAAGGCGA GGCTCACTCA AAATTAAATA GAATCTTACA 600
GACTTTTTTT GTCTGGCTTC TTTAATTAGC ATAATTATTT TGAAATTGAT 650