EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM055-01116

Organism

Mus musculus

Tissue/cell

ESC_NPC

Coordinate

chr11:96604370-96605000

Target genes

Number: 10
Name	Ensembl ID

Gm11537	ENSMUSG00000085242
Snx11	ENSMUSG00000020876
Cbx1	ENSMUSG00000018666
Gm11517	ENSMUSG00000081249
Nfe2l1	ENSMUSG00000038615
Copz2	ENSMUSG00000018672
D030028A08Rik	ENSMUSG00000078700
Cdk5rap3	ENSMUSG00000018669
Sp2	ENSMUSG00000018678
Scrn2	ENSMUSG00000020877

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TFAP2A	MA0003.3	chr11:96604547-96604558	TGCCTGAGGCT	-	6.32
TFAP2B(var.2)	MA0812.1	chr11:96604547-96604558	TGCCTGAGGCT	-	6.62
TFAP2C(var.2)	MA0814.1	chr11:96604547-96604558	TGCCTGAGGCT	-	6.62

Enhancer Sequence

ACCTGTGATA TTGTAGCAAT GGCCCTTGAA GTGCAGTGGG GAAGTGATTT AGGAGAATAT 60
TAAAGGCAAT GTGGAGATTC AAGGCGCCTC TCTCAGGGAG ATCTGGAGAA ATACGCAGCA 120
CAGATGGGCC GAGCAGATTA AACATTTCCG TCACATTGTT TCCAAATTGT GTTGCGGTGC 180
CTGAGGCTGG TACTGCGGTC AGAGCAAAAC AGAGTGGCGG AGCTGCGAGC TGCACAGTTT 240
ATGGAATACA TATTAATATG CCCGTCTCAC ATGGTATCAC AATTCTATCA GCTCTGAAAT 300
GGGGCTGCCT CTATTGTTCC TGAATTCTGC ACCGGGCACC TTGTTTCCTC CCGTCTGTAA 360
ATGTTTACCT TGCCTTTCCC CTCTCTCTGG TAGGTGAAGT GTAAGTTGTC TGCTCCATTC 420
CTGGCTCTCT TTACAAACCT GCTTCTCTTT ACCCCTCCCT CCATGATTTC TCTGTGGCCT 480
CTGCTTGCAC TGCACACAGT TTTTCACACA CATTTCCATC ACCAAGAGCA TCTGGTGTGC 540
ACAGATCCTA CACACCTCCC TGGCCTTGGC TGCGAGGTCA TGTGTTCATT CACACCCTCT 600
TCAGGACATT CAGGCTGTAT CCTCCCTCTC 630