EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM055-01004

Organism

Mus musculus

Tissue/cell

ESC_NPC

Coordinate

chr11:77778600-77779890

Target genes

Number: 13
Name	Ensembl ID

Gm12732	ENSMUSG00000082646
Gm11191	ENSMUSG00000081924
Myo18a	ENSMUSG00000000631
Pipox	ENSMUSG00000017453
Sez6	ENSMUSG00000000632
Phf12	ENSMUSG00000037791
Dhrs13	ENSMUSG00000020834
Flot2	ENSMUSG00000061981
Eral1	ENSMUSG00000020832
BC017647	ENSMUSG00000037750
Nek8	ENSMUSG00000017405
Rab34	ENSMUSG00000002059
Aldoc	ENSMUSG00000017390

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

REST	MA0138.2	chr11:77779208-77779229	GGCGCTGTCCAAGCTGATGAA	-	6.85
RFX3	MA0798.1	chr11:77779446-77779462	GGTTGTCATGGCAATA	-	6.19
RFX4	MA0799.1	chr11:77779446-77779462	GGTTGTCATGGCAATA	-	6.08

Enhancer Sequence

GGCATCCTGG AGCTAGGAAT GCTCTGACCC TGTCTCTTCA TCTTGTCAAG GCTTTGCCAT 60
CCAAACTGGG GGGAGCAGCC TCTGTCAGCA GGGACCTTAA TGCTGGGCAG AGGTTGTCCA 120
GGCCCTCAGC AGTGGTAGGT CCCCACCCTG GCAGGGATGA CCATCTGGGC GGCCCCTCCA 180
GCCTCCCTAA TGGCTCATCA ATCCTCCTCA GCAGCAGGCA TAATTTCATG CCACAGTAAC 240
CTTTTCTCTT GCTGCAAATT CCTTTGCACA AAACTCCAGT TCCCTCTTTG TGCTTCCAGA 300
CAAAAGTGGG AGAACACAAC AGGGCCGGAG GCCTAGCAGG GGGAGCAGAG TCCTAGGAGA 360
GCCTAGGGGA GCTGGCCCAC TCCTGCTCTT TGTCCCAGCG GCCCTCCCTC CTCTGCCCAG 420
TTTTTGTCAA TGATCAGCTC TTTCCTTAAT GAGTGTAATT CCCCTAATTA TAGACTGTAA 480
TTAGCCCTGA TCCCAGAGAT GGGAACAGGA GGAGCGTGTG CTCACGGGCA TTTCTCGTGG 540
GCTGGAGAAA GAGGGTGCCA GGAGAGTGAG GGAGGGCCTG GGAACACACG CCTGCACCTG 600
TGCAGGCAGG CGCTGTCCAA GCTGATGAAG GAGAGGGCAC AGTCGTGAGC TTCCACACAG 660
GCCTGTGGCT GGATAGATTC CTCTGGCCGG GTCCCAGTCC CCTAGTCCGG GTGGAGAGTC 720
AGAGTGCCGG GGAGGCCCCT CCCTCCTGCA TCCAAGCATT CCTGGCACTG GAGTTGGCTC 780
CGAAACAGCC GCCAGCAAGA AAATAACTCA ACAGATTGTG GTGGTGCAGA CTCCCTGGGA 840
ACGGTTGGTT GTCATGGCAA TAGGAAGCTC ATCTTGGGAA GTGGCACTTA CCCACGATGG 900
AGTCTGGGGG TGCCTCTCGA TGCTACCAGC CCCCTGCTTT CACATGATTC CAGCCCACTC 960
CCTCCCCAGG TTGTGCTGGG ACTCACGGGG AAGATGAGAG CGCAGGTGCT GGGTCTGACA 1020
CCTGGCCTAT GGCTCCCAGG GAGTCAGCTC CTCCTCATCC CCAGGCTGGG TGCAGTCCTC 1080
CCTATCCTCC CCGAGGGAGA ATCAGTGACT TGCTGGACCA GCTCCAAGGC CAGCCTGGAC 1140
TGTCACTCTC AGGTGTCTCT GACTCCACCG GCCAGGATCC CATATTAACT GGGGCCAGGT 1200
AGGAAGCAAA GGACCTCGAG AGGCAGGCAG GTACTCCAAT CCCTACCCTA CCACACTTCT 1260
ACAGTATGAC AAGGGTCAGA AGCCCTCTGA 1290