EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-19047

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr9:107423120-107424450

Target genes

Number: 19
Name	Ensembl ID

Cish	ENSMUSG00000032578
Hemk1	ENSMUSG00000032579
6430571L13Rik	ENSMUSG00000037977
Tmem115	ENSMUSG00000010045
Cyb561d2	ENSMUSG00000037190
Nprl2	ENSMUSG00000010057
Zmynd10	ENSMUSG00000010044
Rassf1	ENSMUSG00000010067
Tusc2	ENSMUSG00000010054
Hyal2	ENSMUSG00000010047
Hyal1	ENSMUSG00000010051
Nat6	ENSMUSG00000079334
Hyal3	ENSMUSG00000036091
Ifrd2	ENSMUSG00000010048
Sema3b	ENSMUSG00000057969
Gnai2	ENSMUSG00000032562
Slc38a3	ENSMUSG00000010064
Gnat1	ENSMUSG00000034837
Rbm5	ENSMUSG00000032580

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Ascl2	MA0816.1	chr9:107423779-107423789	AGCAGCTGCT	+	6.02
Ascl2	MA0816.1	chr9:107423779-107423789	AGCAGCTGCT	-	6.02
KLF4	MA0039.3	chr9:107424259-107424270	CCACACCCTCC	+	6.32

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01574

chr9:107416864-107490682

Th_Cells

Enhancer Sequence

CCAGGGCCCT CTCGGATTCC CACGATGGCT GGGGAAACAG CTCAGTTGCT TGTCATTGCC 60
TGGCATTTAC AAGGTCCCAG GTTCAATCGC CAGCATCACA TAAGCCACGT GTGATGGTGC 120
GTGCCCATAT CCCAGCATTC TGAAGGTGTG TGCAAGAGAA TCAGGAGTTC AAAGTCACCC 180
TCAGCTGTAT AAGGGAGGCA AACACGGACT GCAGAGCTTG TCTCAAAAGA ATAAAATCTG 240
CACACAGCAG GGTAATCCGG TCCAGATGGG CAGAGAGAGA GGCCACATTC TCAGGTGTGT 300
GAGCACACGC CCGTGCAAAA ACAAACATGT ACACATACCT ATGTATTCAC TGCACACACA 360
TGCAAGGCTC GTAAGCCCAA GGCACAGGCA CAGCTGTTAG ACCATCCCCC CCACCCCCCC 420
AGACACTCCC AGCATTCTCC CTTGTCTCTA CTCCTTGGAA GGGAGGAGAC TAGACCTTCC 480
CTAGGTCCCT GGCTCCTCTC AGCCTGGAAA GCAGGTGTGC AGAGTCCAGC AGCAGCCCTG 540
TCTCATCACA CTCCAGAACA GTTCCTACCC CCTGTGGGTT CCCCGTCCCC CAGCATCCTG 600
TTCCAGGAAG AACACCCCAG CCCCAGACCT CCACGATGCA CTGCAGTACC TCCACTGCCA 660
GCAGCTGCTC ACACCTGTCT CTGGTTGGAC TGTCTGTGCC CGTGAGAAAC CCTTTCGGTT 720
TGGCCATGTT GATGCCTGAC ACAGAACAAA AGCAAGACCT ACCAAAAATG CAAACAGCTG 780
CGGCAAAGAG AGATTTTTTT TTTAAAAAAA AGAAAAAAAG AAAAAGAAAA AAGAAAAACC 840
CCGCAGCCCA AAGCTGATTC CCTTCCTCAA AGTCTCTTAC GGAGGCAAAG GAAGCTCTGC 900
ATGCGGTTTT TCCATTATGG ATGTGATAAG AGCTAGACCG GCGCCTCCCC CAGACCATGC 960
ATATATATAG CAGTGTGTGT ATATATATGT GTGTGTGTGT GTCCGTGTAT ATGTGCTATA 1020
CAGCAGTATG GAAGCATATA CAGCCACGCC AAGGGACTCA CTGCCGACAG AGGACCAGGC 1080
CCGGGCAACA TATTGGCTAT AACTGCCCTT CTCCTGCGAT GCTGTAGTCT CCACAGGCCC 1140
CACACCCTCC TCGCCCTCCC TTCTCTCTGG CTCAAACCTG AACGCGGAAG TGGCGGGTCC 1200
CCTCTTTGCC GGTGTCTCCC CCCTCCCTCA GGCTGCCTTG TCCCTACCTG TCCCTCCAGC 1260
CCCATCAGCT CTGAGCCCCC TGGCCTCCCG CCTCCCCAGC CCCCGCCGGA TAACCCCCCC 1320
GTTTCTGTTG 1330