EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-18878

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr9:78243930-78244510

Target genes

Number: 10
Name	Ensembl ID

Dppa5a	ENSMUSG00000060461
Ooep	ENSMUSG00000032346
Gm8087	ENSMUSG00000083032
Ddx43	ENSMUSG00000070291
Gm8093	ENSMUSG00000087052
E330016A19Rik	ENSMUSG00000032344
Mto1	ENSMUSG00000032342
Gm17324	ENSMUSG00000090317
Eef1a1	ENSMUSG00000037742
Slc17a5	ENSMUSG00000049624

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EOMES	MA0800.1	chr9:78244142-78244155	GTTTTCACACCTA	-	6.67
RREB1	MA0073.1	chr9:78244346-78244366	TTTTGGGGGGTGGGTTGGGG	-	8.06
TBR1	MA0802.1	chr9:78244144-78244154	TTTCACACCT	-	6.02
TBX20	MA0689.1	chr9:78244144-78244155	TTTCACACCTA	-	6.14
TBX2	MA0688.1	chr9:78244144-78244155	TTTCACACCTA	-	6.32

Enhancer Sequence

TAGGTGAGCG CCGGCGGCGC CCAGGCTCGC TGCATGACGG GGCGGCGGCG TCGGGGCTCC 60
AGCAGCGCGG GGGCGCAGTT CTATGGCGGG CCGGGGCGTG TGTGGGAGAG AACCTCCTGG 120
AAGACTCGCG CGGCATCCGC GGTAAAGGTC TTTCCGGTTT CCCGCAGGGG CCAGCAGCTC 180
AGTGCGGAGG TGCAGCCATC ACCCTCTAGG TCGTTTTCAC ACCTAGTGTG CTTTAGTGTC 240
AGGTCAGAGC CGCAGCTTCG TCTCTGCCAG GAGGTTTAAC TTGAGGTGAA TGTAACTGCG 300
GAGAGCAGTA CGCGGGAGTC TTAGATGCGC AATTTTCAAC TTTTCTGAGA TGCATTTTAC 360
AGTGATGGAG ATGTTTCCCT CAGTTGGCTT CAATTCTTAG TTTCAGTTAT AGGGCTTTTT 420
GGGGGGTGGG TTGGGGTCCG TGAAGTGAAT ATATTTAGTT CTAAAAGCCT GCTTTGTGGC 480
ATTTAATCGT ATGTTTTAAG GCTGGTTACT AGAATAGACA AAGATTCCGT TTGCAGGGTC 540
CAAGCTCCCC CGCCCTCCCC ACCCCTCCCA ATCTGAACAA 580