EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-17871

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr8:108088970-108089680

Target genes

Number: 21
Name	Ensembl ID

Nol3	ENSMUSG00000014776
E2f4	ENSMUSG00000014859
Elmo3	ENSMUSG00000014791
Tmem208	ENSMUSG00000014856
Fhod1	ENSMUSG00000014778
Plekhg4	ENSMUSG00000014782
Tppp3	ENSMUSG00000014846
Zdhhc1	ENSMUSG00000039199
Hsd11b2	ENSMUSG00000031891
Atp6v0d1	ENSMUSG00000013160
Agrp	ENSMUSG00000005705
Gm8841	ENSMUSG00000091957
Ctcf	ENSMUSG00000005698
Gm5915	ENSMUSG00000080021
Acd	ENSMUSG00000038000
Pard6a	ENSMUSG00000005699
E130303B06Rik	ENSMUSG00000013155
4933405L10Rik	ENSMUSG00000013158
Gfod2	ENSMUSG00000013150
Cenpt	ENSMUSG00000036672
Nutf2	ENSMUSG00000008450

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr8:108089073-108089085	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr8:108089077-108089089	AAACAAACAAAC	-	6.32

Enhancer Sequence

TGAATTTCTG AGTTTGAGGC CAGCTTGGTC TACAGAGTGA GTTCCAAGAC AGCCAGGGCT 60
ACACAGAGAA ACCCTGTCTC GAAAAACCAA GAAAGAAAGA AAGAAACAAA CAAACAAACT 120
GGTGCCCCAA CAGTGCTGGG GTGGGGTGTG AATGCAGGTT GGGGCCAAAT ACTTGTACGT 180
GAATTTCTGA TTTACAGAGC CACCTCTTGC TTTTCCAAAC AGTCTTGAAG ACTCTACACA 240
GCCAGCGGTT CAGAGCTGGG AGGAACCTCT CGCTAAACTG GCTTAGCAAT TCCCCAGGAC 300
GACCCAACCC TCAGACCAAC ACCACCAAGA CACAACGATT CTAAAGCCCT TGGGGGAGGA 360
GAGAAGCCTT TTCCATCTAA CTTCCCTAGG CACTGCCACC CAACAGGCCT AGGGTTGGGC 420
CAGGGGGAAG AAGCTTGGAG GCGCACTCGT CGCGCCGGCT AACCAATCCT CGGGGACCCG 480
TCCTTCTAAA TTATAGGACT AGCTCGACGA GGTTAGAGGC AACCCGAGCC CAGGTAAACC 540
ACTGCGGTTC TTGAAGGCTT GTTTACGTCT GGGCCCCCGC GCAGAGCCGC AGCTAGAGGC 600
AGACTCCTTC CTGACATGCC CACCATCAAT CAGCTCGCGG GTTCCCAGAG GCCTCGCGTG 660
CCCTTCCCGG CTCAGGGAGG CCCCCCTCAG ACAGCCCGGA CCCGCGGCTC 710