EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-17524

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr8:86280280-86281640

Target genes

Number: 9
Name	Ensembl ID

Ndufb7	ENSMUSG00000033938
Tecr	ENSMUSG00000031708
Dnajb1	ENSMUSG00000005483
Gipc1	ENSMUSG00000019433
Ptger1	ENSMUSG00000019464
Pkn1	ENSMUSG00000057672
Ddx39	ENSMUSG00000005481
Cd97	ENSMUSG00000002885
Lphn1	ENSMUSG00000013033

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr8:86280374-86280393	TAGCCAGAAGAGGGCACCA	+	7.21
RREB1	MA0073.1	chr8:86281058-86281078	GGTGGGGGGTGGGGTGGGGT	-	6.12
RREB1	MA0073.1	chr8:86281057-86281077	AGGTGGGGGGTGGGGTGGGG	-	7.74

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01557

chr8:86238666-86314189

Th_Cells

Enhancer Sequence

TTTTTCTTTT TCTTTATTTA TTTTTAAATT ATTGTATGTG TCTGGGTGTT TTGCCTGTGT 60
ATGACTGTGT AACATGTGCA TGCAGTACTT ACAGTAGCCA GAAGAGGGCA CCATCCCCTG 120
GAATTAGAGT TAGCTATTTG TAAACTGCCC TGTGGGTGCT GGGAATTGAA CCCAGGTCCC 180
TTTGGATAAT TATTAAGGAA TACTAGAAAT AAAGAATAAT CTTGGTGTCC ACAAAGGGAC 240
ACGCAAACAA AGCCAAAATA GCTTGGCAAG GCACACCTAA CCCTGACCCC AACTCCGACC 300
ACGACCCCAA CCTCAACCCC AACTCCAACC CCAACCCTAA ACCCTAAACC CTAAACTCAA 360
ACCCAAACCC AAACCCAAAC CCAAACCCAA ACCCTAACCC TAACCCTAAC CCTAACCCTA 420
ACCCAAACCC TAACCCTAAC CCTAACTCTA ACCCTAACCC TAACCCTAAC CCTAACCCTA 480
ACCCAAACCC TAACCCTAAC CCTAACCCTA ACCCTAACCC AAACCCTAAC CCTAACCCTA 540
ACCCTAACCC TAACCCTAAC CCTAACCCTA ACCCTAACCC TAACCCTAAC CCTAACCCTA 600
ACCCTGATTT GGAAAAAAAG TGCTCAACAA AATCCAGGGC AGGCCCACAA GAACACTTAG 660
TCAAGACTGT CTTTTACTCC CCATGTGTGG TGGCTCATCC TATTGGTTGG AGCGGGACTT 720
TATCAGTGAA AAGGAGAAGC AGCAGACTCG GGAGAATCTG AGTCACAGGG GTGGGAGAGG 780
TGGGGGGTGG GGTGGGGTGA GTAGGAGTGG CGGGTAGGGG GTGGGGTAAG TACCTTGATA 840
GAAAGCACAT GCACACAGGA TTTGTCACAG GGAGGAGATA ACAGTTAAGT CTCTCAGGCA 900
GTCCAAATAT CTGGGAACGA GATCTACCTG GATGTAGGAG GATTTCTGGT GGTTAGATAA 960
AAGCCAGCAT TCCTCTGGAA CCTGTAAAAC CAGTTTTCAT CTATTGATTC TCATCTGTCC 1020
CTTTCCTTAC CTGTGGTACC TGTCAGCATA TCAAAGCACA TACTGACCCC CAGGCTCCTT 1080
CAGTATCACA CCCTGCCCTT TGCACCTTCT CCCCTACCTA CAGCCCATCT ACCTTTTTTT 1140
TTTTTGGTTT TTCGAGACAG GGTTTCTCTA TATCCCTGGC TGTCCTGGAA CTCACTCTGT 1200
AGACCAGGCT GGCCTCGAAC TCAGAAATCC ACCTGCCTCT GCCTCCCGAG TGCTGGGATT 1260
AAAGGCGTGC GCCACCATGC CCGGCTTACC AACTACCTTT TTATGACCCT CTATGCTCAT 1320
TCTTCTCGCT CTTGCTATGC CTTAAGCTCT CCCACTGTGT 1360