EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-15971

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr7:53074050-53074740

Target genes

Number: 23
Name	Ensembl ID

Rpl14	ENSMUSG00000046721
Snrnp70	ENSMUSG00000063511
Ruvbl2	ENSMUSG00000003868
Ftl1	ENSMUSG00000050708
Bax	ENSMUSG00000003873
Ppp1r15a	ENSMUSG00000040435
Bcat2	ENSMUSG00000030826
Fut1	ENSMUSG00000008461
Rasip1	ENSMUSG00000044562
Mamstr	ENSMUSG00000042918
Ntn5	ENSMUSG00000070564
Car11	ENSMUSG00000003273
Dbp	ENSMUSG00000059824
Rpl18	ENSMUSG00000059070
Sphk2	ENSMUSG00000057342
Sult2b1	ENSMUSG00000003271
Lmtk3	ENSMUSG00000062044
Kcnj14	ENSMUSG00000058743
Grwd1	ENSMUSG00000053801
Grin2d	ENSMUSG00000002771
Kdelr1	ENSMUSG00000002778
Syngr4	ENSMUSG00000040231
Tmem143	ENSMUSG00000002781

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

REST	MA0138.2	chr7:53074329-53074350	GTTGCTGTCCTAGGGGCTGGG	-	6.03
TFAP2B(var.3)	MA0813.1	chr7:53074147-53074160	TGCCCCAGGGGCT	-	6.03

Enhancer Sequence

TCACTGCCCC GCAGACCTCT GGAAGAAGTG ACCTCCTGGG TTATCTTGGG AGTTTTAAAG 60
GGCTAGGAGC TCAAGTATGG TTGGGGCTCT TTTTCTGTGC CCCAGGGGCT TCTGGAAGCT 120
GTATTTCCCA CAATTAGCCA CCCTCTCATC TGACCTCAAG TGCAACCTCT ACTAGGCCAA 180
TGCTGACTGC AACTCAATGG TTTGTTGGGG ACCCAGCCGC TTGAGCAATG TGGCCCCAAG 240
TCAGGAGCAT CGAAGCTTCT ACAGCAGGGC TTGGAGGAGG TTGCTGTCCT AGGGGCTGGG 300
GAGAATGGCC TCATGGTGGG ACTGTTCCCA GCCTAGGTGC TCTACTTATT GGGCAGGAGA 360
TTGGTGGGAG AGCCTGGGAC CCAAGTCCTG AGTTTCTGTC ATCCTTTCTC CTGGGAATTG 420
TGCCTTGGAC AGTGGCAAGG CCTCACAGTC CCCAACACCC ACTCAACACA TCTCAGGCTG 480
TTGCACAGGC ACTTCCCTGC CTTAATGTTG CTGGGAGCTG CAGGAGGAGC AGCGGAGGAG 540
GAGTCTAGAG CACTCAGTAA ACTATCAGGC AGCCTCCAGG ACAAGGGGTC TTCCTGTACT 600
TTCCAACCGT TCCTCTTCTA ATCACACACG CACGCGCACA CACCTGTAGC ATCTGGGTTC 660
CCTCTCCAGC CCCCACACTC CCCCCCCTCA 690