EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-15919

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr7:52806120-52807520

Target genes

Number: 30
Name	Ensembl ID

Rps11	ENSMUSG00000003429
Rpl13a	ENSMUSG00000074129
Cd37	ENSMUSG00000030798
Rpl14	ENSMUSG00000046721
Trpm4	ENSMUSG00000038260
Hrc	ENSMUSG00000038239
Snrnp70	ENSMUSG00000063511
Kcna7	ENSMUSG00000038201
Ntf5	ENSMUSG00000074121
Gys1	ENSMUSG00000003865
Ruvbl2	ENSMUSG00000003868
Ftl1	ENSMUSG00000050708
Bax	ENSMUSG00000003873
Dhdh	ENSMUSG00000011382
Nucb1	ENSMUSG00000030824
Ppp1r15a	ENSMUSG00000040435
Plekha4	ENSMUSG00000040428
Hsd17b14	ENSMUSG00000030825
Bcat2	ENSMUSG00000030826
Fut1	ENSMUSG00000008461
Izumo1	ENSMUSG00000064158
Rasip1	ENSMUSG00000044562
Mamstr	ENSMUSG00000042918
Ntn5	ENSMUSG00000070564
Car11	ENSMUSG00000003273
Dbp	ENSMUSG00000059824
Rpl18	ENSMUSG00000059070
Sphk2	ENSMUSG00000057342
Lmtk3	ENSMUSG00000062044
Grwd1	ENSMUSG00000053801

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF4	MA0039.3	chr7:52806418-52806429	CCACACCCTCT	+	6.02
NFIL3	MA0025.1	chr7:52806733-52806744	TTATGTAACCT	+	6.14
SRF	MA0083.3	chr7:52806684-52806700	TGACCATATATGGGCA	-	9.15
SRF	MA0083.3	chr7:52806684-52806700	TGACCATATATGGGCA	+	9.33
ZNF740	MA0753.2	chr7:52806843-52806856	TTGGGGGGGGTGG	-	6.37

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_10051	chr7:52803839-52806869	Embryonic_stem_cells
mSE_10051	chr7:52807106-52808041	Embryonic_stem_cells

Enhancer Sequence

TCAGCTTTCC CAGACGTGAG GTTTGTGCTC TGCCTGTCTC AGGCTTCTCC CTTCTCCTCC 60
ACGAATGTTT CAGTTCTGAG GACTCGGCCA TGAAACAGAA GGGAACAGGT GTCTCCGTTT 120
CTGGTTGGAA CTCAGACTCT CTTAGTTGCC CTGTGGCTTG AAAGAGGCCA TGCCTGCCTG 180
CAGCTCTCTC TTCCAAGCTC CCTGTTGCAC TTGCTTTGCC AAACTAAAGC ACGCAATCTG 240
AGGGGGTGGG GGTGGGGAGA GACACAGAGT TAGAGTAAGA ATATAACATC TTTCCTGACC 300
ACACCCTCTT CTCCAGCTAG GCCCTGCTTC CTAAACTCTT GTAATGGTAT TAGAGAGAGG 360
GCTGCCTGGT CCTAAAGGAA GCTGACATAG TTGTTAGGTC AAACAATTGT TCCCTTGCAC 420
AACCTGGGAA ACCCCCGTCG CGCCCTCTGC ACCCCCAACC CCAATCCCGC TCCGAACCCC 480
AACCCCACCC ACACAGAGAA AACTCCAGGC TAACATGTCC TCGCTTCTCC TCATCCATGA 540
GTACCCTCTT AGGGGTTCAG TTTCTGACCA TATATGGGCA CAATCCCAGC TCCTAGCTGG 600
CAGTCATTGC TCCTTATGTA ACCTCTATAA ACCCCCCACT GCTTTAGCCT GGATGTGTGA 660
TGTCACTGAC CTTCACCCCA GAGCTGCCTC CTGATAAACC TGCCTTTCCG CGCTTTTTTT 720
TTTTTGGGGG GGGTGGGGGG GTTTCTAGAC TGGCTTTCTC TGTGTAGCCC TGGCTGTCCT 780
GGCACTCACT TTGTAGACCA GGCTGGCCTC GAACTCAGAA ATCCGCCTGC CTCTGCCTCC 840
CGAGTGCTAG GACTAAAGGC GTGCCCCACC ACGCCCGGCC TTTCCCTGCT TTTTAATCTG 900
GTCTAATCTG GTCTACATCT GCATGACTAA GGAAGAGAAA AAGTCTATCC AGAATCCTCA 960
CCTTTGAAAG TGATAAGGAA AGTGCCTCAA GGCTGTGGCT GTCCTGAGGT GAAAGGAGAG 1020
TCACTGACAA ACAATACCAG GTGTGAGCCT AACCACGGAG GTGCCTTAGA GGGAAGGAGG 1080
GACTTCATTA AAAGTGAGAA AGAAGCCTGG TAGTGGTGAT GCACGCCTTT AATCCCAGCA 1140
CTTTCGAGGC AGAGGCAGGC AGACTTCTGA GTTTGAGGCC AGCCTGGTCT ACAAAGTGAG 1200
ACCCAGGACA GCCAGAGCTA TAGAGAGAAA CCCTGTCTCA AAAACAAAAA CAAAAACAAA 1260
AACCAAAAAA CCCCAAAACC AAAATCAGAG GAGAGAGAGA GGCCCTGAGA AGAATGACAG 1320
GAGGCCAGAG GAGTCCTCCA GAGAGCGCCT TCAAAGCACC TCTTAGAGTG GGTCCCCCTG 1380
AGGAATCTCA GACTCTTTTC 1400