EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-15838

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr7:52254240-52254720

Target genes

Number: 23
Name	Ensembl ID

Vrk3	ENSMUSG00000002205
Atf5	ENSMUSG00000038539
Tbc1d17	ENSMUSG00000038520
Ptov1	ENSMUSG00000038502
Ap2a1	ENSMUSG00000060279
Cpt1c	ENSMUSG00000007783
Bcl2l12	ENSMUSG00000003190
Scaf1	ENSMUSG00000038406
Rras	ENSMUSG00000038387
Prr12	ENSMUSG00000046574
Nosip	ENSMUSG00000003421
Rps11	ENSMUSG00000003429
Rpl13a	ENSMUSG00000074129
Aldh16a1	ENSMUSG00000007833
Slc17a7	ENSMUSG00000070570
Pth2	ENSMUSG00000038300
Dkkl1	ENSMUSG00000030792
Cd37	ENSMUSG00000030798
Rpl14	ENSMUSG00000046721
Snrnp70	ENSMUSG00000063511
Ruvbl2	ENSMUSG00000003868
Bax	ENSMUSG00000003873
Bcat2	ENSMUSG00000030826

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Klf1	MA0493.1	chr7:52254277-52254288	TGGGTGTGGCT	-	6.14
Nr2f6(var.2)	MA0728.1	chr7:52254525-52254540	TGAACTCTGGACCTT	-	6.32
Rarb	MA0857.1	chr7:52254525-52254541	TGAACTCTGGACCTTT	-	6.42

Enhancer Sequence

CTTCCAGGTG CTGGGGGAAA GATTTCAGAC GCATTTCTGG GTGTGGCTGG ACCAGGGCAG 60
GGGGTGGGAT AGGACTGGAG GGACAGACGG GAATTGATTG GCAGATTCTA GGAACAGAAT 120
CCTGAAAGCC AGGTTGCGTT TCTTTTTTTT TTTTTTTTTT TTTTTTTTTT TAAAGATTTA 180
TTTATTATTT TATGTAAGTA CACTGTAGCT GTCTTCAGAC ACACCAGAAG AGGGAGTCAG 240
ATCTTGTTAC GGATGGTTGT GAGCCACCAT GTGGTTGCTG GGATTTGAAC TCTGGACCTT 300
TGGAAGAGCA GTCGGGTGCT CTTACCCACT GAGCCATCTC ACCAGCCCTA GGTTGCGTTT 360
CTTAAGAAAC GTTCTGGAGC AATGGTTCTC AGTCCCTGGG ACGCGACCCC TTTGGGGGTT 420
GAATGACCGT TTCATTGAAA AATAAGTATT TTGACTTCTA ACAAAACTAC AGTTATGTAA 480