EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-15492

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr7:28179920-28181130

Target genes

Number: 15
Name	Ensembl ID

Egln2	ENSMUSG00000058709
Rab4b	ENSMUSG00000053291
BC024978	ENSMUSG00000078786
Snrpa	ENSMUSG00000061479
Ltbp4	ENSMUSG00000040488
Shkbp1	ENSMUSG00000089832
Gm20479	ENSMUSG00000092367
Blvrb	ENSMUSG00000040466
Pgam1	ENSMUSG00000082016
Sertad3	ENSMUSG00000055200
Sertad1	ENSMUSG00000008384
Hipk4	ENSMUSG00000040424
Pld3	ENSMUSG00000003363
2310022A10Rik	ENSMUSG00000049643
Map3k10	ENSMUSG00000040390

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PLAG1	MA0163.1	chr7:28180956-28180970	CCCCCTTTGGCCAC	-	6.5
RREB1	MA0073.1	chr7:28180753-28180773	CCCCACCCCACCCCACATCC	+	6.63

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_10414

chr7:28178966-28181327

Embryonic_stem_cells

Enhancer Sequence

GGAGGGGAAG CTGCATGCCT GTCACCCCAG AACTAGGGAG AGGACAGTGA GTTTGTGGCG 60
GGTCTGGCCA TATAGTAGGA CCCTGTTAAT TTAATTTTGT TTTAAAATCC TTAACCTATT 120
CTATGGGTTG AATAAGCCTA AATCTAGCCC CAGCACCCCA CTGTCAGACC AACATTCCCC 180
AAAACCTCCA GACTATTTCC ACATTTAGCT TCCTGCAAAT TAGGCCTCTA AGCTAGTGAA 240
GACCCATCCC CCTGGGCTCA GAAATTCTAA TGAGACCTAA ATGCAGCACC TGTGACTAAG 300
AACACAGTTA ACCCAAATTA TGACCAGCCA ACGCCCAAAA TATGAGCAAC AGGCTGCCTG 360
GAATCAATCT ACCTCCAAAA TACAGGATTC CCAATGTGGA TCAGACCAAA CCTCCTGATC 420
CAGCACACAC ACACACACAC ACACACACAC ACACACCCAA GCTAAGGTAA TCCAAAATTC 480
GAACAGTAAA AATGTTTTCT TTAGGCTGTT TTCTGAACCC CTTCCTCCCC ACAGGAGTGA 540
GGGCTCAGCT CCGGGCTAGA GTGGTTGCTT GCTTTGCATG AAAAAGTTCT GGAATCCTGT 600
TCTATCTCTA GCACTTGGGG AGGGGGAAGT GCCTGTTAAA CAAGACTTGT TCCCAAAGCC 660
GCAATCTCCT CTCTCCCAAA GCCTGAACCT GGGAGAGTTT GCTCCTCCCT GCTCCAGTCA 720
CAAGATCCTC CTCCTCCCTC CAGGAAAAAA AAAAAAAAAA AAAAAAGCCC GAACTCCGCG 780
GTCCCGGGAG GTAAACGCAG TCATATTCAA GGACAAATTC CGAGCCGGCC AAACCCCACC 840
CCACCCCACA TCCCCAGAGT ACGTGCTCCT CAGGAGGCCA GGACAGCTTC TCACATACAC 900
ACACGCGCAA AGTCAAACGC TGAATCCCCC AACTCCCTAC ACGGGGATGA ACGCGCAACT 960
AGAGTCCCAC AGTGAAGGCA AAAGCCCTAA CGGAGGTGAT ACGCATCCTC TAGGTAAAGC 1020
CTCTTAAAAG GAATTGCCCC CTTTGGCCAC TCAGTGCTAG GCTAGACTCT CTCCACAACC 1080
AAGAAAAACC TCCCCAAAAG TCAAAGCCCC TTGGACTCAG ATCATATATA ATACCTCATA 1140
TCCCTATGCA GAGCCCTCGT CACCCCCCCC CCCAAAGTGA TTCACCACCA CCCTGTCATC 1200
CGAGGGTTCT 1210