EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-14974

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr6:124989130-124989860

Target genes

Number: 18
Name	Ensembl ID

Phb2	ENSMUSG00000004264
Tpi1	ENSMUSG00000023456
Cops7a	ENSMUSG00000030127
C530028O21Rik	ENSMUSG00000030329
Acrbp	ENSMUSG00000072770
Lpar5	ENSMUSG00000067714
Chd4	ENSMUSG00000063870
Gapdh	ENSMUSG00000057666
Ncapd2	ENSMUSG00000038252
Mrpl51	ENSMUSG00000030335
Vamp1	ENSMUSG00000030337
Tapbpl	ENSMUSG00000038213
Cd27	ENSMUSG00000030336
Tuba3a	ENSMUSG00000067702
Ltbr	ENSMUSG00000030339
Scnn1a	ENSMUSG00000030340
Tnfrsf1a	ENSMUSG00000030341
Cd9	ENSMUSG00000030342

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F7	MA0758.1	chr6:124989566-124989580	TTTTGGAGGGAAAA	-	6.61
Gabpa	MA0062.2	chr6:124989834-124989845	GTCACTTCCGG	-	6.14
ZBTB7A	MA0750.2	chr6:124989834-124989847	GTCACTTCCGGGG	-	6.05

Enhancer Sequence

GTTTGAGTTC TCTTTCCCTA AGAGCAGCAA CCTGACAGGT TTTGACTAGG GTGAAGGCTG 60
CTATCTAGCA TATACTTTGA TGACCCAGTC TTTTCAGTAC ATAAGTCCAT TACAAAACAC 120
AAACATGGAT CTCCATATCG CACGCCTTTA ATCCCAGCAT TAGTGAGGCA GAGGAAGGTC 180
TCTTGGAGTT CGAGAACAGC GAGGGCTACA CAAAGAAACT TGTAAGTGAT GAGAGATGCA 240
AAGGGTTAAA TTTGCAAAGC CTGACAACTT CTGAAGAAAG CATCTGCCTC CGAGACTATT 300
CTACTTAAGC TGGGACGTTG GTGGCCAGAT TCATAATTAG AAAAGCAAAA CAGCTCGATT 360
CCCTACTTGT TGAAAGCGAT TATTTGCAAA ATATAACTAC ACATAATAGA TTCCCCCATT 420
TACCAAACAT TCCTAGTTTT GGAGGGAAAA AAGTTTGCTA GAGAATGCAA AATGGCGACT 480
TCGCGTGACG TCATGCCTGT CGCAGACACA TATTGCCGCC TTATTAAGGG CGGAAGCCAG 540
GCTAAATCAG CCTCGCTGTA GATGACCGTG AATAGGCGCA AAAAAAAAAA AAAAAAAGTT 600
CAGTTTCCGG CGGATGTATC CGAGGCAGAT AGTTTAGTAA GGGCGGAAGT TCAGGTACGG 660
AAAAGGTGTA ATCCAAGAAT GGTTACAGCG CCTGTCGTGT ATCAGTCACT TCCGGGGAAG 720
ATCGGAAGTT 730