EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-14934

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr6:124660820-124661890

Target genes

Number: 28
Name	Ensembl ID

Pex5	ENSMUSG00000005069
Clstn3	ENSMUSG00000008153
C1s	ENSMUSG00000038521
Gm5077	ENSMUSG00000079343
Lpcat3	ENSMUSG00000004270
Emg1	ENSMUSG00000004268
Phb2	ENSMUSG00000004264
Ptpn6	ENSMUSG00000004266
Grcc10	ENSMUSG00000072772
Atn1	ENSMUSG00000004263
Eno2	ENSMUSG00000004267
Spsb2	ENSMUSG00000038451
Tpi1	ENSMUSG00000023456
Usp5	ENSMUSG00000038429
Cdca3	ENSMUSG00000023505
Leprel2	ENSMUSG00000023191
Gpr162	ENSMUSG00000038390
Lag3	ENSMUSG00000030124
Ptms	ENSMUSG00000030122
Mlf2	ENSMUSG00000030120
Cops7a	ENSMUSG00000030127
C530028O21Rik	ENSMUSG00000030329
Acrbp	ENSMUSG00000072770
Chd4	ENSMUSG00000063870
Nop2	ENSMUSG00000038279
Gapdh	ENSMUSG00000057666
Ncapd2	ENSMUSG00000038252
Mrpl51	ENSMUSG00000030335

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr6:124661315-124661333	AGAAAGAAAGAAGGAAGG	+	6.56
EWSR1-FLI1	MA0149.1	chr6:124661319-124661337	AGAAAGAAGGAAGGAAGG	+	7.85
EWSR1-FLI1	MA0149.1	chr6:124661323-124661341	AGAAGGAAGGAAGGAGGG	+	7.97
IRF1	MA0050.2	chr6:124661305-124661326	AAAGAAAAAAAGAAAGAAAGA	-	6.34
RORA(var.2)	MA0072.1	chr6:124661769-124661783	GAAAACTAGGTCAT	+	6.04

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01499

chr6:124652698-124730044

Th_Cells

Enhancer Sequence

CAACCACTTT ACAAAGGAAA AACAATCTTG TTTTCTCACA GTCACTAGGA AGGGGCTAAG 60
GACCAAATTT AAGCCCAGGG CAGACCTGGC ATGGTGAAAT TCACCTATAA ATATTCTAAT 120
ATTTAGGAGG CTGAAGGTGG AGAGTTCCAA GCCAACCTGG ACTGCATCCC AAGACTGCCT 180
AAAACCACCA CCCAGCAAGA GAATGTGTGT GTGTGTGTGT GTGTGTGAGA GAGAGAGACA 240
GAGACAGAAA CAGAGGGGAG CAGGAGTTTG GGAGGGAACT TCTGGGCCTA CACATTGAAC 300
AAGTTTAGCT CTGAAAGGCA AGACATACAA AAGAAGGAAG GAGCCGGGCG GTGGTGGCGC 360
ACGCCTTTAA TCCCAGCACT CGGGAGGCAG AGGCAGGCAG ATTTCTGAGT TTGAGGCCAT 420
CGTGGTCTAA AGTGAGTTCC AGGACAGCCA GGGCTATACA GAGTAACCCT GTCTCAAAAA 480
AACAAAAAGA AAAAAAGAAA GAAAGAAGGA AGGAAGGAGG GGGCTGGAGA GATGGCACAA 540
ACTTTCTTGT ATAAGACTCA AGTTAGGTTC CTAGCACCTT CATGAGGTGG CTCATGGCCA 600
CATGCAGACT TGCATGCATA AATAAAGGTA AAGTAAATAT TTAAGGGGGA GGGTAAAAAA 660
GCAAAGACAA AGGCTTTTTA AATAATCTGA TCCAGACATA CTTCAGAATA GGTAAATACA 720
GAACAAGCTG CCAGTCAAGC CCCATTTAAC AAAATAAAGC ATCAAGTCCT TGGTAGTAAA 780
AGGCTGGGGA AGTCACTGGC CTTTGGAAAC GTGGGAACCC TCAATAGACA ATGCTTCCCT 840
CATTTTGCAT TATACATCAC AGACTCCGTG ATAAGTCAAC TAAAAGCAAG GCGAGGGCTG 900
AAATGAAAGT CCAGAGCAAA AGGACTACCC CCAGGATATC AACAGCCTGG AAAACTAGGT 960
CATTCTTCCA GAGCAAATTT CAAGGCTCCG CTTTTCCATG CACTCTGCGG CCCTGGTTCC 1020
CACACAATCT GATCCATCAA TTCCCTACCT CCGCACTCAC TGTTCAAAAC 1070