EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-14812

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr6:113326930-113327300

Target genes

Number: 21
Name	Ensembl ID

Lhfpl4	ENSMUSG00000042873
Mtmr14	ENSMUSG00000030269
Cpne9	ENSMUSG00000030270
Brpf1	ENSMUSG00000001632
Ogg1	ENSMUSG00000030271
Camk1	ENSMUSG00000030272
Tada3	ENSMUSG00000048930
Arpc4	ENSMUSG00000079426
Ttll3	ENSMUSG00000030276
Rpusd3	ENSMUSG00000051169
Jagn1	ENSMUSG00000051256
Il17re	ENSMUSG00000043088
Il17rc	ENSMUSG00000030281
Creld1	ENSMUSG00000030284
Prrt3	ENSMUSG00000045009
Tmem111	ENSMUSG00000030286
Fancd2	ENSMUSG00000034023
4931417G12Rik	ENSMUSG00000033963
6720456B07Rik	ENSMUSG00000033940
Vhl	ENSMUSG00000033933
Irak2	ENSMUSG00000060477

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr6:113327198-113327210	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr6:113327202-113327214	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr6:113327206-113327218	GTTTGTTTGTTT	+	6.32

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_11689

chr6:113326518-113329918

Placenta

Enhancer Sequence

GTCTGGAATC TGCAGCATTA AGGAAGAGGA GATACTAGTG TGCCCTGTCT TCCTATGTCC 60
TCTGTTTCCC TACGTTGGGT CGTTTCTAGC ATTCTATTTG ACAGGGTTCT CCCTGCCTCC 120
TCTTGTCTCA CTCCATTCCA CCTCTGCACC TTCTCTGTGT CCCTGGCTAG TTTGGAACAC 180
AGGCTGGTCA GGTGAACAGA ACTAAGTTCC AGCCCATTTT CTTATGTGCG TTTCTAAACA 240
TGTTATTTAA CCTGAATCTC CGGTTTTTGT TTGTTTGTTT GTTTGTTTTT CTTTTTTCCA 300
GGACAAAAGA TGATGCCTCA GTCTATTTCC CCATTAAGAA GTATAAATCT GTAAAATGGG 360
GGCATCGAGA 370