EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-12962

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr4:147182310-147183770

Target genes

Number: 10
Name	Ensembl ID

Gm13135	ENSMUSG00000082925
Gm16503	ENSMUSG00000078160
Zfp534	ENSMUSG00000062518
Gm13136	ENSMUSG00000081179
Rps19	ENSMUSG00000080059
Zfp933	ENSMUSG00000059423
Miip	ENSMUSG00000029022
Fv1	ENSMUSG00000070583
Plod1	ENSMUSG00000019055
Nppb	ENSMUSG00000029019

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESR1	MA0112.3	chr4:147182626-147182643	AAAGTCACCTTGACCCA	-	6
LMX1B	MA0703.2	chr4:147183266-147183277	TTAATTAAAAC	-	6.14
PPARG	MA0066.1	chr4:147182624-147182644	AGAAAGTCACCTTGACCCAC	-	6.86

Enhancer Sequence

GTCTTCATGT TTTATTCAAA CCTAAGGTGT AATATTAATA ACTAAGCCTA TGAAGACTCA 60
TTTCTCAATG CTGTATTTAC ATCAAAGACT ACATATACCT CAGTGTTAAA CTAACGGGGA 120
CTATAACTTT GCTAGGTTAA TATTAATATT TACAGCCAGG AGACAGTTAA AAATTGAAAC 180
ATAAAAACAA AAAGTAAGCC TTTAGGGTCA GGCTTAAAAA TAAGATCCTT GTGACTCAAT 240
GCCCCCAAGG TATGCTAATC ATAAAGCAGA TAGCAACATT CCTCCATCCA CCCACTTATA 300
AGCTGTGCTT TCAAAGAAAG TCACCTTGAC CCACCCCGAC AACTCCAGGA ACTCACTATG 360
CAAATGTGCT AATGTTATTG AGACTCATAC ACAGCTGTCT TGACTTTCCA CTTTCAACTG 420
GTATTTTTGG TATTTTCCAA CAACGCCCTC CCCACCCCCT TGACTTGTGG TTCCTTCCTT 480
TAAATACCCC CTTACCCAGC TACTCTGCAT ACCACAGTCC TCTAGCATTG CATGGTTTAT 540
GACTGTGGGC CTGAGAGCTC TCTTGAAATA AAAGTCCTCT TGCAATTTGC ATCAAAACCG 600
TTTCTCCAGT AATTTGGGGT GTTGCCTCTC CTGAGTCAGA ACGTGGGAGA GTCCTCACCT 660
TTTGGGTCTT TCAACAGTAC TTTATAACGA ATATTTTCGA ATTCAATCAA ATCTGCACTG 720
ATCCCCATAT GACAAATACC TACAAAGCTC TCTAGGGATG CCTATCCAGT TCCCTGGAGA 780
AAGGGAAACG AAATGGCAAA TGGAGGAACA AGGGAGTTAA GAAAGCATGA ATGAATTTGA 840
ATTTGAGGAG CTTTATTATG GCTTTTGCAA AGACAACCAT CCCAATACAC AAACTCCAGA 900
GACGGCCAAG GATCTACGGG GTTATTTAAA AAAAAAAAAA TCTGGCACCC ATAAAATTAA 960
TTAAAACATC ACCATGAACC CAATTCACAG GATCTCAAAC TTCCTGATAA TGGTAAGATA 1020
CCACAACAGA ATTGGGAGAG TGGCGGCAGA AAATGCACCC CTGCTCCACA TGCCTGCCTT 1080
GCTCCTGCCC ATTTCCCAGT CCAACAGCTC CTCTGACTTG GAAGGTGACA GGACCAGCTG 1140
CTCAATGTCC TAGGAGGCCA GCACAGCAAT TGCAGCTTAA AGAAGTTTTC AGGTTCCGCA 1200
AACACTGAAT TGTGAGAGGG GCGGCAGAAA ATGCACCCCT GCTCCACGCC CCTGCCCAGC 1260
TCCTGCCCGT TCCCCAGTCC AACAGCTCCT CTGACTTGGA AGGTGACAGG ACCAGCTGCT 1320
CAATGTCCTA GGAGGGGCAA CTGCAGCTTA AGGGAGTTTT CAGGTTCCGC AAACACTGAA 1380
TTGTGAGAAT GGCGGCAGAA AATGCACCCC TGCTCCACAC GCCTGCCCAG TTCCTGCCTG 1440
TTCCCCAGTC CAACAGCTCC 1460