EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-11574

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr3:90249550-90251680

Target genes

Number: 19
Name	Ensembl ID

Rps27	ENSMUSG00000090733
Rab13	ENSMUSG00000027935
Jtb	ENSMUSG00000027937
Slc39a1	ENSMUSG00000052310
Crtc2	ENSMUSG00000027936
Dennd4b	ENSMUSG00000042404
Gatad2b	ENSMUSG00000042390
Slc27a3	ENSMUSG00000027932
Ints3	ENSMUSG00000027933
Npr1	ENSMUSG00000027931
Ilf2	ENSMUSG00000001016
Snapin	ENSMUSG00000001018
2500003M10Rik	ENSMUSG00000001017
S100a13	ENSMUSG00000042312
S100a14	ENSMUSG00000042306
S100a16	ENSMUSG00000074457
S100a3	ENSMUSG00000001021
S100a4	ENSMUSG00000001020
S100a6	ENSMUSG00000001025

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6	MA0677.1	chr3:90249609-90249623	TGACCTATGACCCA	-	6.27
RXRG	MA0856.1	chr3:90249609-90249623	TGACCTATGACCCA	-	6.13

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_10201	chr3:90249294-90253480	Embryonic_stem_cells
mSE_11454	chr3:90249060-90251508	Placenta

Enhancer Sequence

GTGACAGGGT TTCTCAGTGT AGTTCCTGCT ATTCTGGAAC TCACTCTGTA GACTAGGCCT 60
GACCTATGAC CCAGAGATCT GTCTGCCTCT GCCTCCCAAG TGCCAAGTGC TAGGATTAAA 120
AACCTGGGCC ACCGCCATCT GGCTAGTCAT TGTAAAAACA GCCAACAGTA GCCTCACACC 180
TGTATGTCTT GGGCCACCAG ATTGCATATG GTCCTTTTCT TATATAATTC TACGTAATAA 240
GCTCACTAAC TTTGCTTCCC TTTGGCTTAT CTTGAAATTC TTTCTTGTGG AGTAGTCAAG 300
GATCTAGTTT TTATTGAATG GAGGTCCCTA AAGGGGAAAC TCCTCCTGCT GCTAGTGACA 360
CAGCAGGGCT GTGTCCTCCA GCAAATGTAG TCTCACGCCC GCCCGCCCTC CTTAGTGACC 420
CTCCTCATTC CCATTTTGTG CAACACCAAA TTTATCAGCA TCTCAATCCT TCATTTTAGT 480
TGCGTTCCAA CCCAGAGAGA GTAAATCTTC TTGAAAGGCA TTTTTTAATG GTTAATTTAA 540
AAGTATTTTC TTCGTCTTAA TTTACAAACG TCTTTAAGGC CGCAAAATTG GTCTCTGCCA 600
TTAATTAGAT TTCATAGATC TGTTCCTAAA GGTATAAATT ATTTTGCAGA AATATTATTA 660
AACGTACCAC TATGAAAAAT TACCGGAGCT GAGCTCTTTG ACATAGAGAA AACAGCCGCT 720
GGGAGTGGGG GAGGATATTT GTCTGCTTAT GTCAGCTCTG TTTTTTCCAG GTCCTGGCCT 780
TGCTGGAGCT GTGGGTCCTC CTACCCACAG CTGGATCTCT GCTGCGCCTT CCTACTCTAC 840
TGGCTTGCTT GGTCTTCCCT CCCCGGTCAG GGGCGTCATG TGATCTGATG AGATAGTGTA 900
TGTGAAAGCC TTTGTCAACT GTAAGGCACA GCCGAATGCC AATTGTTGCT TTTGTTATTA 960
CACAAACCAC ACTCCAGGGA AACCCTGCAG CCCTTCTCCA CCCCTCCTCC TAACCCACTG 1020
GGCTGGACAA CCCAGGAAAC GCTGAGGCTA GACAGCCCCT CCCACATGGG CGGGAGCCCC 1080
CCGCTTGGGG GAGGGGCGGT CTTGCTTACC CTCTCCCGCC CCCTTCCCCT CAGTAATGGT 1140
TTTCCCAGTT CTTCCTGGCT TCTGGGGCCT AACTCCGGAA GGAAATCTCA GTTCCAGTGA 1200
AAGTTCTGGG GTTGCAGAAA TCTACTCCTT TGGCGTCTCC ACTGGGCCCC CTCCCAATCC 1260
CCTCCCCTCC TAGTGCCCGC TGGAGCCCGG CTGCCCCGGA AGGATCTGAC CGGCAGTTTC 1320
CTAGAATTGT CTTGCTGGAG CTCCGCAGTC ATCTAGCTCC CCACCCCCTT CCCTACCTCA 1380
TCCCAGTCTC TCTTCCCCAA AGCCAGTCTC TCTGATGGCT CATGCCCGAG TATCACCTCC 1440
TAGGTCCCCA TAGTTACATC ATAGCCTCTC ATTAGGGGGC TGTCTACAGT TCCTGGGAGG 1500
TGGAATTGAG CTTGGGAGCT AAAATGGGTA CCAGGGCCCA CAGAAAGTTG AGCGTGCTGT 1560
GGTTGCCAGG GCGACCATCT TTCTTTATGT TTCTCCTGAG CTTTTCATCC AAGCACCGAC 1620
CTCATAAGCG CCCTCGCTCA GTAAATCACA TCTGACCTTC AAAGCCACCT TTGGTGTATG 1680
TGGGAGTACT GACTGCCTGG TAGCCACATC TCTACGCCCC TGGGGTTCCA CCCTACCTCC 1740
ATGTTTACTT GGCCCAGTCT CCAGGAAGAG GCCTGTGGAG GTCAGGGCAG AGGCCTGTCT 1800
GCATTTGATG GATAGTACTG AAGAAATGTC TGGCACTTTC CTTCTCTGCG GGGGAAGCAA 1860
AGCTACACCT CTCCCTGACA TTCTTGCCTG ATTGTTTAGG AAGGTGTTAG GTGACTTGGG 1920
AAAGAAGGAT TCAGACTTTG CTTGCTTATT ATTTATTTAT TTATTTATTT ATTTATTTAT 1980
TTATCGTTGA CTGGTTATTA TCCTCCAAAC TTGATAGTTG AAAAAGATTT TTGGCCGGGC 2040
AGTGGTGGCG CATGCCTTTA ATCCCAGCAC TTGGGAGGCA GAGGCAGGTG GATTTCTGAG 2100
TTAGAGGCCA GCCTGGTCTA CAAAGTGAGT 2130