EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-11564

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr3:90189760-90190170

Target genes

Number: 19
Name	Ensembl ID

Tpm3	ENSMUSG00000027940
Rps27	ENSMUSG00000090733
Rab13	ENSMUSG00000027935
Jtb	ENSMUSG00000027937
Slc39a1	ENSMUSG00000052310
Crtc2	ENSMUSG00000027936
Gatad2b	ENSMUSG00000042390
Slc27a3	ENSMUSG00000027932
Ints3	ENSMUSG00000027933
Npr1	ENSMUSG00000027931
Ilf2	ENSMUSG00000001016
Snapin	ENSMUSG00000001018
2500003M10Rik	ENSMUSG00000001017
S100a1	ENSMUSG00000044080
S100a13	ENSMUSG00000042312
S100a14	ENSMUSG00000042306
S100a16	ENSMUSG00000074457
S100a3	ENSMUSG00000001021
S100a6	ENSMUSG00000001025

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFYB	MA0502.1	chr3:90190041-90190056	GCATGCGCCAATCAG	+	6.05
RREB1	MA0073.1	chr3:90189772-90189792	GGGGTGGAGGTGGGGTGGGG	-	6.75

Enhancer Sequence

GGGATGGGGA TGGGGGTGGA GGTGGGGTGG GGAAGACTTG CCTTGCAAGT GTGCAGACCC 60
GGATTCAACC CCCTCAACCT GGGAGAGATC CTGGGAGAAT GTGGGGATGG GAGCATCTCT 120
AGGATCCCCT GGCCAGCCAG TCTAGCCTAG CTGGTGAGCC TGTCTCACAG GGGGCAGCTG 180
TGTGCTTGAG GAGAACACCC AGGGCTGTCC TCTGGCCTCC GTATTCACAT GCACACACAT 240
GGGCATACAC ACATACAAGA TAAAAGGGGG AGAGGCAAGG AGCATGCGCC AATCAGGGGA 300
GCGTCCTTCC TCCTCACGGA GAGTCCTCTG TGGGGTTCCT TGGTGGAGGT TAAGAACCCC 360
TAACAGTTGC AGATACATGA ATGAAGGGTT GGGGCAGGAA CGGCTGGTTA 410