EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-11501

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr3:88985340-88985840

Target genes

Number: 27
Name	Ensembl ID

Gm10704	ENSMUSG00000074479
Rusc1	ENSMUSG00000041263
Fdps	ENSMUSG00000059743
Pklr	ENSMUSG00000041237
Clk2	ENSMUSG00000068917
Scamp3	ENSMUSG00000028049
Fam189b	ENSMUSG00000032657
Gba	ENSMUSG00000028048
Thbs3	ENSMUSG00000028047
Mtx1	ENSMUSG00000064068
Muc1	ENSMUSG00000042784
Krtcap2	ENSMUSG00000042747
Trim46	ENSMUSG00000042766
Dpm3	ENSMUSG00000042737
Slc50a1	ENSMUSG00000027953
Efna1	ENSMUSG00000027954
Efna3	ENSMUSG00000028039
Efna4	ENSMUSG00000028040
Adam15	ENSMUSG00000028041
Gm10702	ENSMUSG00000074467
Zbtb7b	ENSMUSG00000028042
Flad1	ENSMUSG00000042642
Cks1b	ENSMUSG00000028044
Shc1	ENSMUSG00000042626
Pygo2	ENSMUSG00000047824
Pbxip1	ENSMUSG00000042613
Pmvk	ENSMUSG00000027952

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Lhx3

MA0135.1

chr3:88985370-88985383

AAATTAATTTTCC

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01437

chr3:88963927-89055714

Th_Cells

Enhancer Sequence

CCAAGACAGC AGTAGACAGG CAGAGGCTGA AAATTAATTT TCCTGGAGAG GCCATGTCAC 60
AATGGACGAA AGATCAAGGG AGTGCCCAGA AGTGAGAAGG ATCTCTTTCT CTCTCTCTCT 120
TTTTTTTTCT TGGTTTTTTT GAGACAGGGT TTCTCTGTGT AGCCCTGGCT GTCCTGTCCT 180
GGAACTTACT TTGTAGACCT GGCTGACCTC GAACTCAGAA ATCTGCCTGC CTCTGCCTCC 240
CGAGTGCTAG GATTAAAGCC GTGGGCCACC ATGCCTGGCT CGAATCTGTT TTTCATGAGG 300
ATGCCAGGAG AGCTAGGAGC GGATGCTTCA GAAATGACTG AAAAGTATGA AGAGAATAGA 360
TGTAGTGGGA TTGGTTCATG GGATGCCGCC ATATTGGCCG AGGCCCTGAC CGTTGATGGG 420
CCTGGAGCAT GTTCTTAGAC CTAGGGGACT CCGGGTGAGC AGAGCCCCGG CAGAGTGGTC 480
GGTCCTCACC CGTGCATCTT 500