EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-10343

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr2:90743860-90744570

Target genes

Number: 9
Name	Ensembl ID

Nup160	ENSMUSG00000051329
Mtch2	ENSMUSG00000027282
Kbtbd4	ENSMUSG00000005505
Ndufs3	ENSMUSG00000005510
Gm17661	ENSMUSG00000091037
Celf1	ENSMUSG00000005506
Gm13777	ENSMUSG00000082108
Psmc3	ENSMUSG00000002102
Slc39a13	ENSMUSG00000002105

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PHOX2A	MA0713.1	chr2:90744150-90744161	TAATTTAATTA	+	6.62
PROP1	MA0715.1	chr2:90744150-90744161	TAATTTAATTA	-	6.32
PROP1	MA0715.1	chr2:90744150-90744161	TAATTTAATTA	+	6.62
Phox2b	MA0681.1	chr2:90744150-90744161	TAATTTAATTA	+	6.62

Enhancer Sequence

TCCCTTCTTG GTACTTGTTT ATACCAAGTT CTTAATCAGA GAACTTCAGG GCTGAAGGAC 60
CCTGAAAGAT TACCTCATTG CCCATACTCT ATCCCCTGTC ACTTTGTGTA ATAGATGTCC 120
TGGAATGAAA AGAAGCTTTC TATTTCCCAG TGTGATTCTG TTGACTGAAC ATAAAATCAC 180
CACAGGGTCA TTCAAGTACT TGAGCACCCA CACATCACAG AATCAAGGAT TAAGTATTTT 240
CTGCACTTGG AAACAGACCT GCTTTGTCGT TCACTGGAAC TGTGACTGAA TAATTTAATT 300
ATCTGGACCG CTTCATGATC TACATCTATA TGGACAGTAA AACGTTATGC GTCTCATCAG 360
GCTCTTATGA AGTCCAAGGT GCCTAGTAAA TACTAAATTG ATGTGAGCTA CAATTATTTT 420
GGACTTTGAG TCTCAAAAGT TTTTGTTACC TGCGCTCAAA GACAATTTCA TCGGAGGACA 480
AAAAAAAAAA TCAAATCCTG ATAACGAGCA AAAGGCGATC AAGATCAGAA GGGAACAAAT 540
ATCTAGGGCA CAGGAAGTGC TCGATTCTAA CAGCAAAGTG GAGACCATAG CAATCTCCAA 600
GGACAAGCAG AGATTTGCCA GGAGGGAAGG ACATTCCAAG GCAAGGACAA ACATCTGACA 660
GAAACAACGA AAGGCCCCAG CTAACGTTGG GGGAAAAAGC GCCATCCGCA 710