EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-10200

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr2:50904250-50906010

Target genes

Number: 2
Name	Ensembl ID

Gm13498	ENSMUSG00000083270
Rnd3	ENSMUSG00000017144

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr2:50904258-50904270	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr2:50904274-50904286	AAACAAACAAAC	-	6.32
GATA5	MA0766.2	chr2:50905180-50905190	TCCTTATCTG	-	6.02
RUNX1	MA0002.2	chr2:50904767-50904778	AAACCACAGAC	-	6.62
ZNF263	MA0528.1	chr2:50905459-50905480	TCTTCTTTCCCACCCACCTCC	-	6.43

Enhancer Sequence

AAAAAAAAAA ACAAACAAAC AAAAAAACAA ACAAACAAAA AACTTGTTGT AAGCCTGTAA 60
CGTCTCCAGT CAGAAGTTGA TCCTAAGGCA GCTCAGTCAA TCTGATGTGA TCTCACAGGA 120
ATTTACACAG AGGCCAGACT TTACAGACAG CAGGTGGATC AGGATGGGTC AGGATGAGGT 180
CTGATGTCCT CAGGGACCAG TAGGAGAGCA CACGCCTGTA TAGCACATGT CAAGAATGTT 240
AGTATGACTT TATATTTAAA AACAATAAAA CAGCCCTTGT CTTGTAGCAT AAACGCTACA 300
CAAAGCTGAA TTTAGCCAAT GTGGCTGGTG AGTATAGATT AAAATCGCTA AGAAACACTG 360
GAATAAAAGG CAAAGCTTTT TTCCAAAGCT GACAGCTTCA GTGTTGCCAA GTAACGGTGG 420
TAATTCCTTC TTGTTCACAC AACACTAATT CGGATTGCTG GCTGGTTGCT GCATTGGGTC 480
CCCTTCCATA GCTGTGGAGG ACAGACCCAA GAGGATAAAA CCACAGACAG GTTTTTATTA 540
TTATTTTAAA TACCAAAGAT CTAACTCCTT TAAAATCTGA ACAGCATGGT TTCATTTTAG 600
TTCAACACAC CTTTTGTCCC CTTACTGTGT AAATGAGCCT TAGTCCCCGC CCTTGAGGGC 660
TTATAGCCTT GTGTAGACAC TAGACATATT ATCAGAAAAT GACCTTTGTG ACCAGGAATA 720
GCTTTAGTTG CTCTGTATCT TTGTCAGCTT TATCCCAAAT AATCTTGCCC TCTGAGGCAC 780
TTGGGCCACG GGTACTTACC TAACCGAGTG TGGGAAGACA TGCTGCCTGT ATGGGCATCC 840
TTGGAAGGTT AAATTCATTG TGCCCTTTTC TACAAGCTGT TGATCTGAAG GCCAGAGGAA 900
TCTAGGGACT TTCTTGGTTA CAATGAAGTT TCCTTATCTG AGTCTAGTGA GGAGATCACC 960
TTCTGTTTCT AAGGTGGGGC TTAAACACTT GTGTTTCTTA CAGATTCTGA ACAGATGTCG 1020
GTGGTGCTAG TTCAGAACTG GTTCGCAATT CTGAGAATTC TAAATATCCA CAATGCGTAA 1080
CTGGGTTCTA TGTACAGGTG GACACACACT CAAAGTGTTC AGAGAACCGT GGTAGCACAT 1140
GGGAGATCAG TTCTCAGGCC CTCCATCTCT CAGACCTTTC CTAAGGAAGT AAGAACTTGC 1200
CAGTGGTTTT CTTCTTTCCC ACCCACCTCC TTTGCAATCA CCCGCCTACC TCCCACTTTG 1260
CAAAAGAAAG GCACAGCCCT TTCTTCAAGG GAAAGCCATA TACATTCCAA TAGCAGTGAG 1320
CTGAGTCCTT CTCTAGCAGA AGCCATACTC CCCTGATCTG CTCTGCATTA GGATGTCTTC 1380
CCCCTGTTTT TGTTCTGTAG CCCCTGCTTT AGGGATTCTA ACCGCATCTC ATACTGCCAA 1440
CGCCCATCCA GAAGACTGTT TTCTTGTGTT TTCTTCCTAA AGTTTTATGG TTCCAGGTTT 1500
TAGGGTTAAG TCTTTCTTCC ATTTTGAGTT GGAACGTCTC CACATCACGT CAGACAAGAA 1560
TCTACCTTTA TGCTTTTGCG GGGCTTATTT AGTTTTTTTC CATGATACTT GTTGATACAC 1620
TGATCCTTTA TCCACCATGA TCAAAGTTTC TGGGCTTTTT CAAATATAAC TCAGATGTAA 1680
AAATGGTTAG GTATATTCGT TGAATCTTCC CCACCATTGG CTTCCTTTGG TTGTGGTTGT 1740
CTTTCCATAT CTTCTGAAGC 1760