EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-10115

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr2:32479880-32480950

Target genes

Number: 21
Name	Ensembl ID

Ciz1	ENSMUSG00000039205
1110008P14Rik	ENSMUSG00000039195
Ptges2	ENSMUSG00000026820
Gm13413	ENSMUSG00000083004
Naif1	ENSMUSG00000039164
Slc25a25	ENSMUSG00000026819
Fam102a	ENSMUSG00000039157
Dpm2	ENSMUSG00000026810
St6galnac4	ENSMUSG00000079442
St6galnac6	ENSMUSG00000026811
Ak1	ENSMUSG00000026817
Eng	ENSMUSG00000026814
Fpgs	ENSMUSG00000009566
Cdk9	ENSMUSG00000009555
Sh2d3c	ENSMUSG00000059013
Tor2a	ENSMUSG00000009563
Ttc16	ENSMUSG00000039021
Ptrh1	ENSMUSG00000053746
1700019L03Rik	ENSMUSG00000038987
Stxbp1	ENSMUSG00000026797
Rpl12	ENSMUSG00000038900

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr2:32480654-32480672	CCCTCCCTCCTTACTTCC	-	6.86
ZNF263	MA0528.1	chr2:32480899-32480920	TCCCTCCCTCCTCCCTTCTCT	-	6.17
ZNF263	MA0528.1	chr2:32480875-32480896	CTCTCTCCTCCTCCTTCCCCC	-	6.34
ZNF263	MA0528.1	chr2:32480874-32480895	TCTCTCTCCTCCTCCTTCCCC	-	6.99
ZNF263	MA0528.1	chr2:32480868-32480889	CTTTCTTCTCTCTCCTCCTCC	-	7.99
ZNF263	MA0528.1	chr2:32480871-32480892	TCTTCTCTCTCCTCCTCCTTC	-	8.49

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_05272	chr2:32480058-32484847	E14.5_Heart
mSE_08062	chr2:32480710-32482450	Kidney

Enhancer Sequence

TGGCCCCAGT CAGTCCCCGC CACTGGGCTT AAGAACCTTC CTGTGTAAAT CCTGTTCCTG 60
AATGGGTTTC TGATGTAGGA GCTGATAAAA TCAATCTGCT TTCCCCGAAA GTTGTGCAAT 120
GCACACACCA GCCTAAGTAT TGGGAGTAGC CTTTCAGGCC AGCACAGGAC AGATGGCCCA 180
GTCCATCTGC CCCCACAGTG GCAGGACCTT GGTATGCAGG CTGCTACTGG TGTTCAGGCA 240
CCACCCAAAC TGGTTGTCTG TGGCTCCCAA GCATTTACAA AAGTTTCCAG TTTCACCCTA 300
TTTTGCTGTT CGGAGCCATG CTTTGGAGGC CTTATGTGAG CCGATCCCTC TGTCCTGCTA 360
TGCTTTGAGC ACCAGCACCC TGTACCACTT CTCCTGTAGA GAGCTCCCTA ATTAGGCACA 420
TGGCTTTCCA CACGGGGAGT CTCAGGTGGC CTCTGGGTCC TGCTCTGTGC TTAGGGGTTC 480
CCTGGGCACA GCTGGAGTCT GCTGTTGGCA TCATCGTGCT CCACCGGGTA CTCAGAAATG 540
AGAGTCCTCA TTCTTAGCAA ACCCCAATCT GGATACACAA AGCTTTCTGA GTGTTCTTTC 600
TCCATGTTCA ACCATGGAGA GTTCAAGGCT GGCTTATCAT CTACCTAGCC ACCAGATAGT 660
CAGGATCCAG GAGGAGCTCA AAGAGTCATT TCCAATAGGG GAGATGTCTC AGGGTAGGGG 720
GTCTCAGAGC CTGAGGATGG TGACCCTGGA ACAACAAAGT TTACACCCTG GTCCCCCTCC 780
CTCCTTACTT CCCTGGTCTG GTCTCCTTGA TTAAACGCTG AGATTAAACA CACCAACTTG 840
TCTGAGCATC AGCTGACCCA GCTAAAGAAC CCTTGTCTGT GGAGAGTCGT GCGGGCATAG 900
AGTGGTGGCA GACACACTGT GTGCAGGTTT AGTCCCAGGG AGTGCCTGGT GGGGACGCTC 960
ACTCCTAAGC TTTCCATGAG AGTTCCTGCT TTCTTCTCTC TCCTCCTCCT TCCCCCGGCT 1020
CCCTCCCTCC TCCCTTCTCT CTGCCATCTC GCCAGAGTGC TGGCTCCCAG 1070