EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-09342

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr19:6071700-6072080

Target genes

Number: 23
Name	Ensembl ID

Ltbp3	ENSMUSG00000024940
Frmd8	ENSMUSG00000024816
Slc25a45	ENSMUSG00000024818
Tigd3	ENSMUSG00000044390
Dpf2	ENSMUSG00000024826
Cdc42ep2	ENSMUSG00000045664
Pola2	ENSMUSG00000024833
Capn1	ENSMUSG00000024942
Syvn1	ENSMUSG00000024807
Mrpl49	ENSMUSG00000007338
Fau	ENSMUSG00000038274
Znhit2	ENSMUSG00000075227
Tm7sf2	ENSMUSG00000024799
1110014N23Rik	ENSMUSG00000024797
Zfpl1	ENSMUSG00000024792
Cdca5	ENSMUSG00000024791
Naaladl1	ENSMUSG00000054999
Sac3d1	ENSMUSG00000024790
Snx15	ENSMUSG00000024787
Arl2	ENSMUSG00000024944
Gpha2	ENSMUSG00000024784
Ppp2r5b	ENSMUSG00000024777
Map4k2	ENSMUSG00000024948

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr19:6071791-6071806	AATGGGCGGGGCCTT	-	6.12
SP4	MA0685.1	chr19:6071789-6071806	GAAATGGGCGGGGCCTT	-	6.48

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01398

chr19:6044161-6085282

Th_Cells

Enhancer Sequence

AATGGTGTCT AGATGGGCAA GAGTTGAGCG AGGGAAATGG AAACGACTAA GGCAGAGGTA 60
CAACTCTCAC TGATACCAAT GATGTGACTG AAATGGGCGG GGCCTTGGCA CATAAGATGT 120
TTATGTTGGT GCAGCAAGCC CTGAGTACCC GTGTCCCTGG TGTGGAGGGA AGAGGGTGAG 180
ACTGGAGGGT GAGATTGGAG GGAAAGTGCT GGGCAGTGGT GGTGCAAGCC TTTAATCCCA 240
GCACTTGGGA GGCAGAGGCA GGCGGATTTC TGAGTTCGAG GTCTACAGAG TGAGTTCCAG 300
GACAGCCAGG GCTACACAGA GAAACCCTGT CTTGAAAAAC CAAAAAAGCT GGGCGTGGTG 360
GCCGGCCTGG TCTAAAGAGT 380