EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-09118

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr19:4190370-4190660

Target genes

Number: 24
Name	Ensembl ID

Tcirg1	ENSMUSG00000001750
Unc93b1	ENSMUSG00000036908
Acy3	ENSMUSG00000024866
Doc2g	ENSMUSG00000024871
Ndufv1	ENSMUSG00000037916
Gstp1	ENSMUSG00000060803
Gstp2	ENSMUSG00000038155
Cdk2ap2	ENSMUSG00000024856
Pitpnm1	ENSMUSG00000024851
Aip	ENSMUSG00000024847
Tmem134	ENSMUSG00000024845
Cabp4	ENSMUSG00000024842
Coro1b	ENSMUSG00000024835
Ptprcap	ENSMUSG00000045826
Rps6kb2	ENSMUSG00000024830
Tbc1d10c	ENSMUSG00000040247
Ppp1ca	ENSMUSG00000040385
Rad9	ENSMUSG00000024824
Clcf1	ENSMUSG00000040663
Pold4	ENSMUSG00000024854
Ssh3	ENSMUSG00000034616
Ankrd13d	ENSMUSG00000005986
Kdm2a	ENSMUSG00000054611
Rhod	ENSMUSG00000041845

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr19:4190540-4190560	GCACACCCCACCCCCACCCC	+	6.23
RREB1	MA0073.1	chr19:4190545-4190565	CCCCACCCCCACCCCCACCC	+	6.27
RREB1	MA0073.1	chr19:4190546-4190566	CCCACCCCCACCCCCACCCC	+	6.27

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_00607	chr19:4184779-4204432	pro-B_Cells
mSE_01389	chr19:4185126-4244466	Th_Cells

Enhancer Sequence

GATCTGCTGT GCGATGTGTC AAGTTTCTGT CTGTGATTAA CTGTGTAAGG GAAACCTGGA 60
GAAGAGAAGA CATCCAAATT TCCATCTGGG GTTCTTGGAC CAGAGGTTAA AAGGGAAAGG 120
ATGTTCAGCT TTAGGGGAAG GTACAGATCG TCAGAGGATA AAGAGATAAA GCACACCCCA 180
CCCCCACCCC CACCCCACCA CGCGGAACCG AGCAGTGACA CCAGCAGCTG AGTTTTGGGC 240
TAGTGTCCTC AGTCTCTGGA CCCTACTCTC TCCCCTACCC ATGCCTCACT 290