Tag | Content |
---|
EnhancerAtlas ID | MM054-08829 |
Organism | Mus musculus |
Tissue/cell | ESC_KH2 |
Coordinate | chr18:38001520-38003010 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
MEF2C | MA0497.1 | chr18:38001642-38001657 | ATCTATTTTTGAATT | - | 6.02 | RFX1 | MA0509.2 | chr18:38002411-38002427 | TGTTGCCATGGAAACC | + | 6.98 | RFX1 | MA0509.2 | chr18:38002411-38002427 | TGTTGCCATGGAAACC | - | 7 | RFX2 | MA0600.2 | chr18:38002411-38002427 | TGTTGCCATGGAAACC | + | 7.36 | RFX2 | MA0600.2 | chr18:38002411-38002427 | TGTTGCCATGGAAACC | - | 7.37 | RFX3 | MA0798.1 | chr18:38002411-38002427 | TGTTGCCATGGAAACC | - | 7.42 | RFX3 | MA0798.1 | chr18:38002411-38002427 | TGTTGCCATGGAAACC | + | 7.69 | RFX4 | MA0799.1 | chr18:38002411-38002427 | TGTTGCCATGGAAACC | + | 7.01 | RFX4 | MA0799.1 | chr18:38002411-38002427 | TGTTGCCATGGAAACC | - | 7.05 | RFX5 | MA0510.2 | chr18:38002411-38002427 | TGTTGCCATGGAAACC | - | 7.26 | RFX5 | MA0510.2 | chr18:38002411-38002427 | TGTTGCCATGGAAACC | + | 7.32 | ZNF263 | MA0528.1 | chr18:38002020-38002041 | TCCTTTGCCTACCCCTCCTCC | - | 6.75 |
|
| Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
mSE_04059 | chr18:37999204-38003322 | Cortex | mSE_04454 | chr18:37999824-38003344 | E14.5_Brain | mSE_04922 | chr18:38000280-38003327 | E14.5_Heart | mSE_05544 | chr18:38000502-38003149 | E14.5_Limb | mSE_09499 | chr18:38000982-38003233 | MEF | mSE_10743 | chr18:37998820-38003555 | Olfactory_bulb |
|
Enhancer Sequence | TCTGAAAGTG TGACCGCGTC TGTTTAAGAG ATGGAACACA GAACATGTGG GTGGAGTCGA 60 GTTGCTTGTC TTAAATAATA GACTCAAAGG GTCATAGTTG TTTGTGTCTT GGCTTTGTCT 120 CGATCTATTT TTGAATTGCG TGTGCTTGTG CAGTGTGCAT CTGACTGTCC AATATGGAGT 180 GCATGTTTCA GATTCCCTGG CGTCTCTAAT AGTATGTGAT GAACTGTAAT GGTGCTTGTG 240 GATCAGTATG CGCTGGCGGT ATCGCTGGAG AGTCCATTGT GGGGGTGGGG AGCTTGAATG 300 CGTGCGCAAC TGAGTGCAGA TTTATTCTCA GGGCTGTCTC CAGGCAGAAA AAGGAGACCC 360 TGCATGGAAG GGAGGGGGCG GGGGAGCAGG AGCGTGAGTG GGGGTGGGAG GGCGCTGGGG 420 AGTTTTTCCT AGTTCCCGCC CCTTCCCCAC TAGCTACCTC CCTTCAGCTA TAGGAGGGGG 480 CTGATCCAGA GGATGGATTC TCCTTTGCCT ACCCCTCCTC CCTTGCAGCT GCCTAGAGGT 540 CTGAGGAACA GCAGGAATGA GTGCCCGGGA GACCATTTTC AGAATATCGA GTTCCCTACC 600 CAGGGCCTCA GTTTCTCTAA GTGAAACTTG CTTTCACGTT CTTTATATAG CAGCAAAGTC 660 GAATTGAAGG GGATGGCACA AGGAGATGGC TTCGGTCCCC CTCCCAGCGC GGCTAATCTG 720 ACTCCTAGGT TCCTGCAGCT CCTGGAGGCA GGACGGTTGA TCCGGAGGAC AGACCCAGAC 780 CCACAGGTTT TCGGGAGGGT TAGTGAGGGC ATGTCCATCA AGAGAGCCGG AAGAGCAGTT 840 TCTGAGCTCT TTCCCTCGGA TTCTGGTTAC CAGCTCTGCC GCCTCCTGGT CTGTTGCCAT 900 GGAAACCAAA CCTTCCAGGC GACTTTGACT TTGCGTGGGA AGGGTGGTGG TGTGTGAGGT 960 TGCTGAGAGG GTTTTCTCAG AGCCTGGTGT TGGAAGGGCG GGGTACTGAG TGCCTGGGTT 1020 CTATTCCGGG CAAGGAAGCA GACGGTAGGG CAAAGAGCAG CTGTGGCTGG TCTCCTAATT 1080 GGTATGTGGG CACCAAAAGA TGAGCGGAAA TGGACAGCCT CTAGGGTTTC AAGGCAGGTA 1140 ACCACCCCAC CATCTCTTCC TTTGCCATAT GAGGCAGCTG TGCGGGCCCA GGGGCTATTT 1200 AAAAGGGTTT TATTTCTAGC ACAGGGCTGT CCAAGGGCCC TTCCTGTTCC CCATGGGTCT 1260 GCTCACTGTG TCTATTGAGG TTACAACTTG CTTGAACAAG CATAGCTTAG TGGCCAAGTC 1320 CTCTGGTGTC TCTGGGCTGA CTTCTGATCC AGGTTGGGCA GGCTCAGGAT TCCAGTGCCA 1380 GGGTTAAGCA CCTTTAACTC GGTGGGGATG GAGGACATTG GTACTGGCCA GAAAACTGTG 1440 GCATCTGGAG GAGCTAGGGG AGTGGGAAGT TGGAGGTGAG CTAAAATTAG 1490
|