EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-08139

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr17:35517580-35519380

Target genes

Number: 20
Name	Ensembl ID

Vars	ENSMUSG00000007029
Msh5	ENSMUSG00000007035
Ddah2	ENSMUSG00000007039
Ly6g6c	ENSMUSG00000092586
Gpank1	ENSMUSG00000092417
Csnk2b	ENSMUSG00000024387
D17H6S53E	ENSMUSG00000043311
Bag6	ENSMUSG00000024392
Prrc2a	ENSMUSG00000024393
Lst1	ENSMUSG00000073412
Ltb	ENSMUSG00000024399
Lta	ENSMUSG00000024402
Nfkbil1	ENSMUSG00000042419
Ddx39b	ENSMUSG00000019432
Gm18733	ENSMUSG00000092444
Gm8741	ENSMUSG00000091655
H2	ENSMUSG00000091705
Gm8750	ENSMUSG00000092560
Tubb5	ENSMUSG00000001525
Abcf1	ENSMUSG00000038762

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr17:35518467-35518488	CTTTACTTTTTTTTTTTTTTT	+	6.01
ZNF263	MA0528.1	chr17:35518221-35518242	TCTTCTTCTTCTTCTTCTTCC	-	6.05
ZNF263	MA0528.1	chr17:35518227-35518248	TCTTCTTCTTCTTCCTTCTCT	-	6.69
ZNF263	MA0528.1	chr17:35518224-35518245	TCTTCTTCTTCTTCTTCCTTC	-	7.37
ZNF740	MA0753.2	chr17:35518727-35518740	CCCCCCCCCCCCC	+	6.03
ZNF740	MA0753.2	chr17:35518728-35518741	CCCCCCCCCCCCC	+	6.03

Enhancer Sequence

GGTGCAGGGG CCGCGGGCAG CTCCTCCCTC TGCCCTCGGG CTGGGGCTCA GTCCTGGGGA 60
AGAAGAAACC CTCAGCTGGG GTGATGCCCC TGTCTCAGAG GGGAGAGAGT GACCCTGGGT 120
CTCCTGATCC CTCATCACAG TGACTGCACT GACTCTCCCA GGGCTCAGCC TTCTCCCTGG 180
ACAGTGCCCA GGCTGTCTCA GGAGGGAAGG AGAGAATTTC CCTGAGGTAA CAACAGCTGC 240
TCCCTTCAGT TCCCCTGTAG CCTCTGTCAG CCATGGCCTC TCCCAGGCCG GGTTCTCAGC 300
CCACTGTCTG TAGACACTGA CTCCTGTCCT GCTGAGTGTG TCAGCCCTTA CACCTCAGGA 360
CCAGAAGTCG CCTTTAACTG ATGGGAGACA TGGACTACCC TACACTAGGC TGATTGCCTC 420
AGTTTCCTGA ATTTTCAAAA GAATACATTC TCCCAGATCC CTCCCTGTCT GTGGGGTTTC 480
CACCCCTTCG ACAACCTAAT TCTCTCTATT CCTATAGTGG TGGTCACATC AGCCCTTATG 540
GGGTACCCTG GAGGAATATC AATAGTGGAA TTTCTTCTTC TTCTTCTTCT TCTTCTTCTT 600
CTTCTTCTTC TTCTTCTTCT TCTTCTTCTT CTTCTTCTTC TTCTTCTTCT TCTTCTTCTT 660
CCTTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT 720
CTCTCTCTCT CTTCGATTTT TTGAGATAGG GTTTCTCTGT ATAGCCCTGG CTGTCCTGGA 780
ACTCACTTTG TAGACCAGGA TGGCCTCGAC CTCAGAAATC CGCCTGCCTC TGCCTCCCCA 840
GTGCTGGGAT TAAAGGCGTG TGCCACCTTG CCCAGCCTTT CTTATTTCTT TACTTTTTTT 900
TTTTTTTTTG GAGGGGGTAA TTTTGTTTCT AGTCATCTTT TGTCTTTTGT CTGCACTGGA 960
GTGATCCTGT TTCTCCCTGC CCTTATATTA TCATGTGTAT CAGTCTCCAC AGGTGCCAGG 1020
GAAGTTAAGA CAAGTTAAAT CAGGGTTCTC TTTAAAGGAG AGATTCCTGT GAACTTAGAC 1080
TGTTTCCTGT CAGAACTAAA CATCCAGAAG CCTCCTGCTC TTCCTCTGTC CCACAAGTTA 1140
CAGTGCTCCC CCCCCCCCCC CAGTGAATCT GGACTTGGAC TCTGAGAGAC AGGGTCTTCT 1200
GCAATCCAGG GCTGGAGTGA GAGGGAAGAC CACACACCCT GTGAGCCCAC TGTGTTGCAG 1260
TGAGTGCTGC ACTGGGGTCC ACAGCATACT CCAGGGATCC TGTGTGACAC ACCTGTACCT 1320
TGTCCCCCAG AGTCAGGGGC TGGAAGTCAT TTTCTCTGGC TGAGTGTCAG AGGTTGACAC 1380
CATTTCTGCT ACACACTCTG TGATGGCTGC TCACTTGGAC TGGCGGTTAT GCTAGTTAGC 1440
AAGATGAACA CAGTGGTTTA GTCTCAGTTG TCACACCCTT CCAGTGGCAT ATGGCTCTAA 1500
TTTCTACTTT TGATACGAAC TCAAACACTT ATTAAATTAG TTAGTTTCCA TTCCATCTTC 1560
CATTCTAGTC CATTCATGCT AAAGAACATC ACATAAGGAC TGCCAGGATG ACCCACTGGC 1620
TCATGTGGAT TCCCTCTTAG CTTCTGAGTC CCCCAGAAAA ATGTGCAGCT GAGGAAACCA 1680
GCTCTGCCTG CAGGTCACCA GTGCCATGAC AGTTGAAGTG TCAAACAGAC ACATTGTTCA 1740
GTGTCATCAG TGATTTAACT GTGCCTTGTG TAGATTTCAG AGGGTCTTGT TAATTGTGGT 1800