EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-08119

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr17:35371470-35371890

Target genes

Number: 30
Name	Ensembl ID

Ehmt2	ENSMUSG00000013787
Slc44a4	ENSMUSG00000007034
Hspa1b	ENSMUSG00000090877
Hspa1a	ENSMUSG00000091971
Hspa1l	ENSMUSG00000007033
Lsm2	ENSMUSG00000007050
Vars	ENSMUSG00000007029
Msh5	ENSMUSG00000007035
Clic1	ENSMUSG00000007041
Ddah2	ENSMUSG00000007039
Ly6g6c	ENSMUSG00000092586
Ly6g6e	ENSMUSG00000013766
Abhd16a	ENSMUSG00000007036
Ly6g5c	ENSMUSG00000034482
Ly6g5b	ENSMUSG00000043807
Gpank1	ENSMUSG00000092417
Csnk2b	ENSMUSG00000024387
D17H6S53E	ENSMUSG00000043311
Apom	ENSMUSG00000024391
Bag6	ENSMUSG00000024392
Prrc2a	ENSMUSG00000024393
Ltb	ENSMUSG00000024399
Gm16181	ENSMUSG00000081650
Nfkbil1	ENSMUSG00000042419
Ddx39b	ENSMUSG00000019432
H2	ENSMUSG00000073411
Gm18733	ENSMUSG00000092444
Gm8741	ENSMUSG00000091655
Gm8750	ENSMUSG00000092560
Pou5f1	ENSMUSG00000024406

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr17:35371545-35371557	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr17:35371549-35371561	AAACAAACAATC	-	6.92

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_00589	chr17:35309410-35373028	pro-B_Cells
mSE_01352	chr17:35301415-35412021	Th_Cells

Enhancer Sequence

AACAACCAGA TGAAGACTCA CAACTATCCG TACTGCTACA GTGTGTACTC ATATACATAA 60
AATAAATAAA TCTTCAAACA AACAAACAAT CACACCATGC TAGCACACAC CCCTTAGTTG 120
ATTGGGCGAT GTTAGGATAA GCTTTTCTGT TACTAGAGAG ATATGGCCAC ATCCCAACCA 180
GGGATCTTCA ACAGTTCCCA AGGACCAAAG AACTAACTTA TTTCCCAACT ATTTTGTTGT 240
ATGATACAGG GTCTCTCTGT AGTCTTGGAG CTCACTGTGT AGGCTACATA CTTAGAGAGA 300
TTCTCCTGCC TCTGCTTGCC CAGAGTCAAA AGACCTGCGC CACCACACCA GGCCTTTATT 360
TCCCACGCAT TCTTTCAGTT CAGATCTGGC CAGCTTCTCA AGACCAGTTC CCACGGACCC 420