EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-07957

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr17:34026640-34027420

Target genes

Number: 21
Name	Ensembl ID

Rab11b	ENSMUSG00000077450
Angptl4	ENSMUSG00000002289
Kank3	ENSMUSG00000042099
Rps28	ENSMUSG00000067288
Cd320	ENSMUSG00000002308
Gm7029	ENSMUSG00000092174
Kifc1	ENSMUSG00000079553
Tapbp	ENSMUSG00000024308
Zbtb22	ENSMUSG00000051390
H2	ENSMUSG00000024309
Wdr46	ENSMUSG00000024312
B3galt4	ENSMUSG00000067370
Vps52	ENSMUSG00000024319
Rps18	ENSMUSG00000008668
Gm4152	ENSMUSG00000092512
Ring1	ENSMUSG00000024325
Slc39a7	ENSMUSG00000024327
Brd2	ENSMUSG00000024335
Tap1	ENSMUSG00000037321
Psmb8	ENSMUSG00000024338
Tap2	ENSMUSG00000024339

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PKNOX1	MA0782.1	chr17:34026670-34026682	TGTCACCTGTCA	-	6.07
PKNOX2	MA0783.1	chr17:34026670-34026682	TGTCACCTGTCA	-	6.18
TGIF2	MA0797.1	chr17:34026670-34026682	TGTCACCTGTCA	-	6.02

Enhancer Sequence

AATCTGAGAA AAACTATTTT ACTTTTTAAC TGTCACCTGT CACAGTGCAG TGCTCTCCCT 60
TTTGGCTGTG AGTATACCAG AAAGTCTCTT CAAGCTGAAC ACCGACTGTG AGTCAGTCTA 120
GACTGAAATG CTGGTAAACA AAGAATGCAG GCCGGTCTTT CCTGACACCA GAGAGATCAG 180
TCCATTAATT GCCACACACA TACGCCTCAG ATGCTTGTGG TGAAGAAGGG CACCCCCATA 240
AACTAGTCAG CAGTCCAAAT GAGCAAAAGG AAGAGGCAGG CGAGGGAATA AGGATCCTCT 300
GGGCCGATGC CCCCATTTCT CCTCTCCCCT TCCTCTATCC CGATCCAGCA GCAACACAAC 360
AGGTCATCAG CAAGAAAGGT ACTTTGCGGA CAAGCGACAA GGCCTCTTTC AGAACCCTCG 420
CTTCTCCCAC AAGGCGATCT GTAAGAACTG AGAAGCACAA ACATGTCGAA TCCGCTTGAG 480
AATTCGAAAT GGGAAATGCT GGAGGGGGAT AAGGGACACG GGATGGTCGC GCCTGCACGA 540
CTGGAATGGC GGGCCAACGT CGCTGCGACT GTCCTGGGAC CTCGCCGTGT GTGTGTGTGT 600
GTGTGTGTGT GTGTGTGTGT GTGTGTTGCC CTCACTGACT CGGCCGCTGG TGTCCTGGGC 660
GCGAGGCGGT GCGACCCTCC CCTGCAGGAC GGCTTGCCCC GACCTGTCCC CGGGACGCGG 720
GTCTCCGGGC GGCCGGCCTG CGTCCTCCGA TCTTGGCGCG AGGTCGTCTC CGCCGCACTC 780