EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-07658

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr17:25954000-25954620

Target genes

Number: 26
Name	Ensembl ID

Lmf1	ENSMUSG00000002279
Gng13	ENSMUSG00000025739
Chtf18	ENSMUSG00000019214
Rpusd1	ENSMUSG00000041199
Msln	ENSMUSG00000063011
Narfl	ENSMUSG00000002280
Haghl	ENSMUSG00000061046
Ccdc78	ENSMUSG00000071202
Fam173a	ENSMUSG00000057411
Metrn	ENSMUSG00000002274
Fbxl16	ENSMUSG00000025738
Jmjd8	ENSMUSG00000025736
Stub1	ENSMUSG00000039615
Rhot2	ENSMUSG00000025733
Wdr90	ENSMUSG00000073434
Gm10012	ENSMUSG00000057580
Rab40c	ENSMUSG00000025730
Pigq	ENSMUSG00000025728
Nhlrc4	ENSMUSG00000090113
A930017K11Rik	ENSMUSG00000025727
Solh	ENSMUSG00000037326
Rab11fip3	ENSMUSG00000037098
Decr2	ENSMUSG00000036775
Nme4	ENSMUSG00000024177
Gm8186	ENSMUSG00000049124
Mrpl28	ENSMUSG00000024181

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Klf1

MA0493.1

chr17:25954409-25954420

GGCCACACCCT

6.32

Enhancer Sequence

GTCTAGAGGT GTGTCCCAAA ATTGGCTATG ACCAGATGGG TCTGGGTCTG GGGAGGGGGG 60
TGGGGAACAT GCAGAAGCAA CCTTATGGAC ATGGGAGGTT GAGGGGCCTG GAAGATACTC 120
AGGTGTATAC AGGATAAAAA GCAGCAAGGA TGGTATTTCG GGGCCTAATG CAAAGTGAAA 180
ATGTGGGCTT GTTAAAAAGT GATTAAGATG TCAAGGTTGG TGCAAGAGAG TAGTCAATTA 240
CATGTGGGTG TCTGCTTGCT TGTGAAGCTG CCTTGGTGAA TGGGCTGCTG GGCTGGTGTG 300
TGGAGGGGTA GCTAAGAGTC TCCTAGAAGC ACCCTGCCCT GCCTCCCCAC ACCCCTGGAC 360
CTGGATTGTA ATTTTAATAT TCAAATCATC TGTTCTAAAC ACCTGCACTG GCCACACCCT 420
GGCTTGTGTC CCCTGTGCCC TGCCTCCCCC CTTGGAATAT TGGGAAAGTA TAACAAGCAG 480
TTTAAGTGCA TTCCTTGGAG TTCAGCCTGA TGCATGCTTG CACAAGCCCA CGCCTGAGAG 540
ACCACCGCTT CCAGAATCCC AGAAACTTCT TCGGGCAGGC GTGAGCCAGG GAGCTGACTT 600
AGTCTGATTT GTACCTGCCT 620