EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-04302

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr12:85557960-85559720

Target genes

Number: 16
Name	Ensembl ID

Numb	ENSMUSG00000021224
Acot2	ENSMUSG00000021226
Acot1	ENSMUSG00000072949
Acot4	ENSMUSG00000052392
Acot3	ENSMUSG00000021228
Acot6	ENSMUSG00000043487
Dnalc1	ENSMUSG00000042523
Pnma1	ENSMUSG00000054383
C130039O16Rik	ENSMUSG00000042507
Gm5436	ENSMUSG00000042962
Ptgr2	ENSMUSG00000072946
Zfp410	ENSMUSG00000042472
Coq6	ENSMUSG00000021235
Fam161b	ENSMUSG00000021234
Entpd5	ENSMUSG00000021236
Aldh6a1	ENSMUSG00000021238

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BATF3	MA0835.1	chr12:85558297-85558311	TGCTGACGTCATCC	-	6.26
BATF3	MA0835.1	chr12:85558297-85558311	TGCTGACGTCATCC	+	6.37

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_07148

chr12:85557488-85560759

Intestine

Enhancer Sequence

AGTACTAGGG AAGTAGGTGT AGGGACCACA CTACAGAAAA CATGTGAGTC ACCCTCAACC 60
CCACACCCAT CGGCCACACA GACACATAGT CTCAGAGCCT GGCACATTTC CTTTACCCAC 120
TAAGCATGCT TCCCCTTTGC CCAGAACACA ATAAAGGAAT TAGGACCCAC CTAAATGTCT 180
GCAGCTGATC CTTCAAGGCT CAAAGTCTGC CCGGCCAGCT CAGACATACA TGACCTGTGA 240
CTCCTCTTTA TAGCTAGCCC CAATCCTGCA ATTCTGCTCA TTCAAACAGC CCTTCCGTGA 300
AGACAGGATT GGACAGTCAT CTCCTATCTC CTTTTCCTGC TGACGTCATC CCACATTTTC 360
TCAGGACAAG TGAAGGTACA GTTCTTGGCA CAATGCTCAG GCTGCCTAAG ATATTTATTC 420
TGTAGTAAAT AGTAAAGAGA GACTGCTTTC CTGAGTAGCC AGACTCTCAG GAGATCAGCA 480
AGCTGTCGGA GGTTAAGGGA GAGGCAAGGA AACAACCATC CAGCAAAAGT TAAAGGGTAA 540
GAAGAATTCG AGAACAGCAG TTCAGGCCCA GATCTGTCCT AAGCATTTGC AATGCAAATC 600
TGCGTTTTGT TCACCACCAC CAAGAGCTTG CACAATAGCG TGTGTATAAA CATCCACGCC 660
AACAAAGCCT GACTGTGCAA TCACGCAGTA ATTACAGACC GGCAGAAAGC TGCTGCTAGG 720
GACTGCACTA TTCAAGCTCT AGACATCCCA TCTCCAACTG TCCACGGCCT GTACACACAT 780
TCCTGCACAC ATCGCCCTGT CCCCGCCGCT GCTACAGCTT CAGGCACAAA CCAAGGAGCC 840
CTGGCGCCAG CTGCTGGGCC ACGCCAAGAC CCCTGCAACT ATGCAAAGAT GTCATAAACT 900
TCTCAGCTGT TCTTTAAAGA CCCAGAAGCA CGAGGCTACC GAGGGCGGGC GGCGGGGAAC 960
CATCATCAAA GTTCCCAGGC AAACTCCTGC AGCCCTAGCC GTTTTAGAAC ACAGAAAAGA 1020
ACAAGATGCC ACGGAGTCCA CTGGAAGCGG CTTTCTGGGT TTTATATAGA AAACACTCAC 1080
ATATGTACGT GGGTGTGCTG ACAGTTTTTA TGGCTAAATT GCAAAGTGTT AGGCCTTAGA 1140
GAGCTTACTG TTGGGTTCGG GGCTTGGGAG GGAGGGAGGA AAAGTGTAGA GTCGGGAGGG 1200
GCTCGTTTCA AGGAGGCCTG GGGGACAACT CGGGTTTTGC TGGTTGGAAA TGGATAGGGC 1260
TGTTGACCCA AACTTCTGAG TTGCTCTGCT CTTCGTCACT GCAAGGCCGA GCAAACAAAA 1320
GTAGAGGGAA AGTTCCTGTA ACTTCCTTCC TGAAACCTGG TGGAGGGCGG CGTAGAGGAA 1380
GGGAACGTTT CCCGGGGAAA CACCGGGAAG GGCTGGAAAA GCAGCTGCAC GCAACCCGAA 1440
GAGATGGGGC GCGGGGTGTA GGGCTGGCTC CGGTCGCAGG TCCGGGGAGG CCCCTTCCCG 1500
GCATCGCTGC GCTCAGGGGT GGCTCCCTGA GAGGGCTAGG CTGCAGCCAG GCCGGTCTAA 1560
GTCCCGAGTC AAAACAACCA CCTCAGGGGC GCAACACCGG CCGAGATCTC CGCCACCCTG 1620
TCCCTCTCCT GCACCCCCAC TCCCAGCGTC CCACGACCCG GCCCGCGCCG CCGAACCCCA 1680
ACGAATTCCG GATCCCCCCT CCCGCCCCGA GCTCCACGTC GGCGCCCCCC ACGGCGGGAA 1740
GGCCACCAGG CTCCCGCGAC 1760