EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-00870

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr1:137154410-137154920

Target genes

Number: 8
Name	Ensembl ID

Lgr6	ENSMUSG00000042793
Ptpn7	ENSMUSG00000031506
Arl8a	ENSMUSG00000026426
Gm4204	ENSMUSG00000079139
Elf3	ENSMUSG00000003051
Timm17a	ENSMUSG00000062580
Shisa4	ENSMUSG00000041889
Ipo9	ENSMUSG00000041879

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr1:137154519-137154539	ACACACACCACCACCACCAC	+	6.27
RREB1	MA0073.1	chr1:137154498-137154518	CCACCACACACACACAAACA	+	6.3

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_07141

chr1:137147403-137156123

Intestine

Enhancer Sequence

TTCTGTCTGG CAAAGCCTGG GCAGCAACAG CCGAGAGGCA GGAAGTTCAG TGTTGCTGTA 60
GACATTCTCT CTTCAACACC CCCCCCCTCC ACCACACACA CACAAACACA CACACACCAC 120
CACCACCACC ACCACCACCA CCACCACCAC CACCATCACC ACCAAGAGCC AGCTACTTGG 180
GGAAGCTGAG GTTGGATGCT CTCTTGAGCC TAGAAGGGTC AGGCCAGCTG GCGCCAAACT 240
GGGAAATTCG GCTCCGAAAA ATAAAAATAA TCTCAAAGCG GGTGGGACCA TGATACAAAT 300
TCTTCTGGGG CTCTCTCCAC AAATCACGTG GGCTCCTGAA CCAAAGAAGC CACCCTGTCC 360
CTCCAAGACA CCGATCTGGT CTCTGACCAG TCCCAGAATA CACCCACAGT AGCCCCAACA 420
CTCCAGCTAG GAACCTCCAA GCCTGAGTGA TTAAGTTCAG AACTGTAAAT CCACTGGACG 480
GTTCCTGAAG CCAGAGTTAG GGAATGTGAC 510