EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-00805

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr1:133786240-133788620

Target genes

Number: 7
Name	Ensembl ID

Fam72a	ENSMUSG00000055184
Pm20d1	ENSMUSG00000042251
Slc41a1	ENSMUSG00000013275
Rab7l1	ENSMUSG00000026433
Nucks1	ENSMUSG00000026434
Elk4	ENSMUSG00000026436
Mfsd4	ENSMUSG00000059149

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXB1	MA0845.1	chr1:133787035-133787046	ATGTTTACATA	-	6.14
FOXC1	MA0032.2	chr1:133787035-133787046	ATGTTTACATA	-	6.32
Foxd3	MA0041.1	chr1:133786451-133786463	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:133786455-133786467	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:133786459-133786471	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:133786463-133786475	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:133786467-133786479	GTTTGTTTGTTT	+	6.32

Enhancer Sequence

CCCAATGCTC GTGCTTCCAC CTCCCATTGC TCCAATGCTC CTACTTACAC ACACACACAC 60
ACACACACAC ACACCCGCCC CTGGGAGCTG AGATTGCAGG TGAACATCAC CCACCAGCAA 120
GACAATTTTC AAGGTAGGAT TTGAGATGAA TAAAAATTCA GAAAGAGCTG AGTTAGGATT 180
TCAGGTTGGG AGGAAAGGGA GTTTAGAAGG TGTTTGTTTG TTTGTTTGTT TGTTTGTTTT 240
CGAGACAGGG TTTCTCTGTG TAGCCCTGGC TGTCCTGGAA CTCACTCTGT AGACCAGGCT 300
GGCCTCGAAC TCAGAAATCC TCCTGCCTCT GTCTCTCAAG TGCTGGGATT AAAAGTATGT 360
GCCACCACTG CCCAGCAAGC TTAGAAGTCT TATACCATTG TCTAAATGGT TTCTGTGTAG 420
GGAGGTACTA ATTAGGTTAA AAAGATGATT ACTACATTGC TTAGGTCAAT TACTTAACCA 480
ATAGTGGTAT ATCCACCTTG TCCCAGGTGC TAGGTACTTG TGACTTTGTA ACTTTGGGGG 540
GGGAGGGGGG ACCGGTGTAC CGCGGCCTAC ATTTGACAGA GGACGACCTT GGGTGTTGGT 600
CCTTGCTTTG GGTGTTGTTT GAAATAGGGT CTCTTTGTTG TTTGCCACTG GGTGTGTCAG 660
GCTATAAAAC TTAACTAGCT TTCAAGGATT CTCTTGTTTT TTTTTCCCAT CTTTCCCTGG 720
GAGCACTGGG AGTACAGATA AGTACTATTG TGCTCAGTTT TGATATTGGT TCTGGGCATT 780
CAAATTCAGT TCCCCATGTT TACATACCAA CTGCTTCTCC TACTGGGCCA TTTCCCTAAT 840
CTTTTAAAGT GCAATAATCT CTTTCGTAGG ACTCCACCCT TATGACCTAG TCACCCCTCT 900
AACGCTCCAC CTCTTAATAC CAACACACAG GAAATTTCAA GATGTGACCT TCAGAGGGAC 960
ACAGACCACT GCAGGAGTAG AAATGGAAGG ATGAAGTTAG CAGCAGGCTC AAACAAAGGA 1020
GTTGTATAAG TCATGTCAAA ACTAGGGCTG GTGGTACAGA ACAGTGATGA GTTATTGCTT 1080
CACCGGTGAA ATGAGCCAAT TCAAGCCAGA TTAAATTATA TAGGCAGGTT TATTGGAAAG 1140
CTGCTCTAGG GCAAGTTCAC TGGCCCCAGG GACCTAGGCC AAGGAAGTCA CCATGGAGGG 1200
GGCATGAGAG AATAGAGACA GAAAGAGCTT CGGGACACAG AGAAGAGTAG GGAGCCCAAA 1260
ATGTCTGGAT TATATAGGGA AGATCTTTGG GGGAAAGGCA GCCCAACCCC TGGGCAGGAA 1320
AAGTAAGGAC TGGGGACAGG GTATGTCAGG TAAGGACTGA AGGATGCTGG GAGAACCTGT 1380
AGGCCCAGCC TGTTTTGATG TGTAAAATAT GCACCTTGGT CCCTTGTCCA CAGGTCTGAA 1440
ACCAAACAGC CAGTAATTCC AGCTACTTGG TAAACTGAGG CAGGAAGATC CCTGGTTCAA 1500
GACCTTCCTT CCTTGTCTAC AGAGTGAATT CAAGATTATC CTTCACAAAT TATCAAAACT 1560
GTCTCAAGAT TTAAAAAAAA AGAAAATTGG TGTCTTCATA CCTGCATCCT AGCACTTGAG 1620
AGGCTGAGAC AGTGTAAGAC TCAAGGGAGC CTTAGCTTAC CAGGGACCCC CTGAGTGAGC 1680
CACGTGGATC AGGGATTGAT GCAAAAAAAC AAGAGGAATT TATTTTTCCA AAGCACTGGG 1740
GTATTCCCAG ACCTGAAGGA GAGGCTGCGA CCCCCAGTAA CCATTCAGTG AGTTTTTATA 1800
TGGTTTCCGG GGGGACAGTA TAGAGAATCA GCAACTGTGC ACAGAACAGT GCACCCTTTA 1860
AACTGATTGG TCTCTAGGGA ATAAGGTGAC AAGGACTTCC ATTGTCTGGA GGTAGGCAAC 1920
AGTCCATCCT ACAGAATGTG TTCCCACCCG CAGGTCGGTT CCTGCCCTGT GGTCTGAAAA 1980
ATGTTAATTC GCCTCTCCCT TCAAGGGGCT AGTGTGTCCT GACCTTCCCA GAGTTCCTGA 2040
GCTGACTTTT CAGCAGGATG ATTGCCTCAA CTTCAAGACA AACCTGGGCC ATGAAATGAG 2100
TTTCAGGATC ACATGGACTA CCATTGAGAT CCTGTCTCAA TGAAAGAAAA AGGAATAATA 2160
AACCTTTAAA AAAAAATTGG AGTTGGATCT AAGGATCTTT TTTTAAAAGT CTAAGGATTT 2220
AAAACAAATG AAGAGTGTTT ATACAAGATC CTGGGTTCAA ATCTCTGTAA CACACATACA 2280
GAGTATGGGG GGGGGTGGGG GGGACGATAC ACATAACACT GAAGCAGTTG GACTACAGAG 2340
GGGTTTGTTT TTCTGACTGA AACAAAGAAT CCACAATCAT 2380