EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-00496

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr1:84856840-84859160

Target genes

Number: 5
Name	Ensembl ID

Trip12	ENSMUSG00000026219
Fbxo36	ENSMUSG00000073633
Slc16a14	ENSMUSG00000026220
Rpl19	ENSMUSG00000064281
Gm10553	ENSMUSG00000073631

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrra	MA0592.2	chr1:84857520-84857531	TTCAAGGTCAT	+	6.62
Esrrg	MA0643.1	chr1:84857521-84857531	TCAAGGTCAT	+	6.02
NFAT5	MA0606.1	chr1:84857588-84857598	AATGGAAAAT	-	6.02
NFATC1	MA0624.1	chr1:84857588-84857598	AATGGAAAAT	-	6.02
NFATC3	MA0625.1	chr1:84857588-84857598	AATGGAAAAT	-	6.02
Nr5a2	MA0505.1	chr1:84857517-84857532	AAGTTCAAGGTCATC	+	8.12

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_10033

chr1:84856814-84862010

Embryonic_stem_cells

Enhancer Sequence

ATTCGAACTA TAATGTCTGT CCTCACATTG ATGAGGCCTA GTACTTAGAA ACCTTCCTGT 60
CATTTTGAGC ACTATAGTCT AATGGAAAAG TCTCTGACCT TTTTTGATTT GATTTCTTCC 120
ACTTATGGCT ATGCGCCATC AGACAGGTCA GTGGACTTAA TTTATTCTAG AACTGGGGGC 180
AGAATCACTT GTTGACTCTG TGCCCTTCAC CACTCTAGAC TCTGCAGATA ATGAAAGAAA 240
GCTCTAAGGG TGGGATGCTT TAGAGACTTG CAGTTGGGCC CAAAAGATAA ACAGTTCTCT 300
GGGCCGGATG CCCACTGTGG AACTCTCCAG TAGATACCAC GGAGATTAGT GCAGCTCAGG 360
CTGTTAAAAT ACTGTACTGT GATTCGGGGA AGGGGAAGGT ATTCCAGGCC ATCCTACACA 420
CTTGTGAGGA GGCAAAGAAT GCCTGGGAAA CTACCCTTGA AAACCTGGGA AAACTCAGGA 480
AAGAAGAACC CAGGTAGGGT GTCAGATGAT GTCAGATATT GCCCGAAAGT GAGAAAAAGT 540
CAAGGGACAT TGCTCTGTAG GTCGAATGCT TGCCTCGCAG ACGGAGCCCT GGGGGTCATT 600
CTTAAACCTA AAGAAAACCA GGTGTGGTGG CACAAGCCCA GATTCCTAGC ACTTGGAGTG 660
AAAAGCAGAA CGATCAGAAG TTCAAGGTCA TCCTACAACC TTGAGTGGAA AGGAAGGGGA 720
GAAGAGTGTG GTTTGCAAAC TAAGTCTGAA TGGAAAATGG GGCAGGGAGG ATAAGGACTC 780
CACCTAGTTC TAGGAAACTT GCTTGTTGGG CTGCTGCTCA GTGGCTAAGA GCTCCAACTC 840
ACAACTATCT GTAACTCCAG TTCCAAGAGG CACACATGTG GGGTATGTGT AGGAAGCAGA 900
GGACACACTC ATTAACTCCT GAGTAAATGT GTATTTTGAC ATGGTCTGGG CTAATAGAGG 960
ACTCAGACTA ACTGGTCCCT GAGAAATCGG GAAAACCATT ACCCACATAG GCCAGGCTCC 1020
AGAGAAATGG CCAACTTTTC TCTGGAGTTG GAGTTTGAGT GTTTATGGAT CCGGTGTGTG 1080
CAAAAACTAG CATCTGTAGC TTCCTCCTCT TGTTTGTTTA CAACCTGACT GCTTGCCCAC 1140
AGAGACCTCC TACTGAGACT AGCTAATCCT CCACACAGCC CCAATCCCCA TGCTGTACCT 1200
AATAAGCACT CTGAGGTTCC TTGTTGAGGC TGTAGCAGTA ACAGAACCCC ACCTGAGCCC 1260
AGCTTCCCTG GGTCTGGCTT TTCTTCAGCC CCTCACCTCC CTTAGCAGGG TTCCAGGGCC 1320
AAAGTCTAGC AGGATGTGGC ATACATACAT GCAGACAAAA ACTTAGACAC ATGAAAATAA 1380
AATAAATCTT TAAAAAAAAA AAACAATGTA AAGACAACCT TGATTCTAAA AGAACAAACA 1440
GAAGTCTCAA CTTGTAGGGA AAAATATGAT CAAAGACTTC AAAGACTCTT TGGTGTAAAG 1500
CCAGGAGTGG TGGCTCACGC CTGTGATCAT CAGTCCCAGG CACTCGGGAG GAGAAGGTGG 1560
GGTTAGCGCC ACAAATTTGA GGCCAGCCTG AGCTACAGAA TGAGCCCCAG TCTTGAGAAA 1620
GCAAATGGTC ATGTGCAAGC TGTGCCATAT AACACAGGCA AAGAACATGT CACACTGTTC 1680
ATGGCACACT GTCAGAATGT TATTGAATAA CTATAAATTG ACAAGGTTTA AAGGATCCAA 1740
AGGCAGAAAC TCATCATAAA ATCTGCCTCC CTGAGTAGCC TGGCCAAAGG CAGATTCAAA 1800
TTCTTTATTC CAATTTTTTT TTTTTTTCAA GACAGGGTTT CTCTGTGTAG CCCTGGCTGT 1860
TCTGGAACTC ACTTTATAGA CCAGGTTGAC CTCAAACACA GAAAAAATCC GCCTGCCTCT 1920
GCCTCCCGAG TGCTGGGATT AAAGGTGTGC GCCACCACGC CCGGTTTACA GGTTTACACA 1980
CGTGGCTTCT TTATTCCAAT TTTAACTACT GATATTAACT CTTCATATCG CACTTCATGT 2040
AGCATGCAGT CAATATATCT TTCTATATAC ATACATACAT ATGTCTGGGA TACAGTGTGA 2100
AGACAAGACA AGCAGGCTGC AGCAGTGTCC AGAGGACAAG AAGTGGGCTG AGACAGTCAA 2160
GCTCCAGGAG AGCACTGGGA GTGGATGGGT TGGTGTCAGG TTTGTGAGCA AAGCTGTAGG 2220
AAAGGAAGGC TTTAGGAACA GAAAGCTTCC AGTCAGGTCC AGATACAGAG GCTGGCAAGC 2280
AGAGGGGCAG GGCATGGAAT AGAATGCATC AACCACAGTA 2320