EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-00494

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr1:84834030-84835800

Target genes

Number: 5
Name	Ensembl ID

Trip12	ENSMUSG00000026219
Fbxo36	ENSMUSG00000073633
Slc16a14	ENSMUSG00000026220
Rpl19	ENSMUSG00000064281
Gm10553	ENSMUSG00000073631

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ELK4	MA0076.2	chr1:84835365-84835376	GCACTTCCGGC	+	6.14
RREB1	MA0073.1	chr1:84834420-84834440	CCCCAACCCCCACCCCACCC	+	6.23
RREB1	MA0073.1	chr1:84834419-84834439	ACCCCAACCCCCACCCCACC	+	6.41
RREB1	MA0073.1	chr1:84835146-84835166	CCCCCAACCGCCCCCCGCCC	+	6.98
RREB1	MA0073.1	chr1:84834427-84834447	CCCCACCCCACCCCCACTCC	+	7.48
RREB1	MA0073.1	chr1:84834415-84834435	CCCCACCCCAACCCCCACCC	+	8.13
ZNF263	MA0528.1	chr1:84835199-84835220	ACTCCCGCCTCTCCCTCCTCA	-	6.12

Enhancer Sequence

ATTTATTATC CATAAACTTG TAACTTCAAA CGCAACACAC ACAAGGCCAC ATATACAAGG 60
CCTCTTGCCT CTTTTCTAAC ACAACTGAGA CCTTTGTTCC CAGCATCATT TTTACCCTAC 120
TCAATCAACT TTCTACCTCG TATTTTTGTT TTGTTTTCAG AGATGAGATT CTAAGCCTCA 180
ACTTGCTGAG TCTTTAAAAA AAAAAAATTA GATGCCAAAA ATAAGATTCG AAAGCAAGAA 240
AAAGTTAGAC ACCACTGTGG CCTACAAACC GAAGAATGCC TGGAGATCTG GTGATTTGGC 300
AGCCAGGCCA GATCGCGAGC TCAGGCTAGG GAGACAGGAG AGCGGTTAGA CCACTCAGAA 360
CAGAGTCACT GCGCTATCAA CCGCCCCCCA CCCCAACCCC CACCCCACCC CCACTCCCCG 420
TTTACCTAGT AACATCCCCG CCCCCAATTA ACGGAGCCAG CAAACTAAAG CCCAGCCCAG 480
AAGCTAAAAC TAAAACCTCT CCGAGACGAG ACACGCTAAA ACGCGTTAAC AGAAACAAAT 540
CTGGGTGGGA AGCCGCCCCT TCCCATTTTC CTCTCACCGC GGATCAATTC CCTCACGTCC 600
CCCTAAAATA GTTACAAGAT GTAATTTAGC AACCACCACC ACCACCTGCA TTTTTTTTTA 660
ATTCTAGTAA TGTCTCTGCA TTCTAACTAA TGAAGGCTGT TATTCCATGG AAGTCCTAGA 720
CAGAAGACTG GGTCTTAAAA CCTTCGTTTT CTGAACATCC CTGTAAAAAC TTCTCTGCAT 780
GCAACCCACC CGACAGGCCC AAGAGTTGAA CTGACGGCCA AACAGTGTAA TAGGTTTTAT 840
GTAATCCACA CATATTAAAT CGCCTGAGTC GCTTTGAATG TTAATACGAT TGGGGTGACA 900
ATTGTCCCAC CTCCCTCCCC CCAAGTCCCA GTTCACCTCT CCGTCCTATT CCCCTGCTAG 960
TCCTCTTAGA GGAGCCTGCT TTCCCTCAGC CAAGTTCCTC GGCCTCTACC GCGGCCCCTG 1020
CAAGCTCGGC GCGTCTTCGT CCTCCCTCAG CCTCGACTTC CCCGGCTGGA AAAGCCGCCC 1080
CGCGCCGGTT CGGCCCGGCT CGGCCCGGCT CGCCCGCCCC CAACCGCCCC CCGCCCCAAG 1140
CAGGAAGACC CTTACCGCGG CCCAAAGTCA CTCCCGCCTC TCCCTCCTCA GACCCTCGCC 1200
TCACAACAGT TGTCACTCGA GCTGCTCCCT AGTTTCCATT TCCGGGCCGT CCACAGCTCA 1260
GCGCCTCCCT TTCCCTGTTT CCGGGCCCCC CGTCCCATTT CCGGGGAACC CTTGCCGTCT 1320
TCACGCCCCC CACCTGCACT TCCGGCCCCC CACTTTCTCC CTTCCTAGAC GCCCTCCAGG 1380
CTCCAAAGAC CATTTCCGGT CCCCTCCCGG CCCCCGCTGG GCTCCCCCAG ACCCCCCACG 1440
CCCTACCCAG GTTCCGCCTA GGGCCTTGCT CATCGCCGGA GGCCGGAGCA GGGACTCGGA 1500
GCCCCCTCCC CCCCACCAAG CCGATCGGCC CTGGCTCCTC AGGCCGCGGG CCCGCTCGAG 1560
CGCCTCACCC GTCAGCCTCG GGCTGCTCCT TCCACGGCCC CGCCGCCGCC GCCGCCAGCC 1620
AGCCAGCCAG CCAGCCAGTC GAGCCCGGAG CTCAGTCGCT ACGATGACAC GGGCGCGCTG 1680
CCTGAGACTT TTTGGCTCCG GTTTCCCCGG CCCCGTCAGC CCCCTCCCCC AAAGCCCCGA 1740
CCCCCCCGCC GCTCGGAACG GCGTCCCAAT 1770