EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-00434

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr1:75377240-75378680

Target genes

Number: 22
Name	Ensembl ID

1810031K17Rik	ENSMUSG00000033159
Zfand2b	ENSMUSG00000026197
Abcb6	ENSMUSG00000026198
Atg9a	ENSMUSG00000033124
Ankzf1	ENSMUSG00000026199
Glb1l	ENSMUSG00000026200
Stk16	ENSMUSG00000026201
Tuba4a	ENSMUSG00000026202
Dnajb2	ENSMUSG00000026203
Ptprn	ENSMUSG00000026204
Dnpep	ENSMUSG00000026209
Des	ENSMUSG00000026208
Speg	ENSMUSG00000026207
Gmppa	ENSMUSG00000033021
Accn4	ENSMUSG00000033007
Chpf	ENSMUSG00000032997
Tmem198	ENSMUSG00000051703
Obsl1	ENSMUSG00000026211
Inha	ENSMUSG00000032968
Stk11ip	ENSMUSG00000026213
Slc4a3	ENSMUSG00000006576
Gm5257	ENSMUSG00000082012

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr1:75378658-75378669	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr1:75378658-75378668	GCCCCGCCCC	+	6.02
Sox3	MA0514.1	chr1:75377710-75377720	CCTTTGTTTT	+	6.02

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_03786	chr1:75377427-75380074	Cerebellum
mSE_04888	chr1:75376234-75378656	E14.5_Heart
mSE_06697	chr1:75375788-75378645	Heart

Enhancer Sequence

ACAAGATAGG AATTGCTGCC GGCAATTGAT TGTAAATGTG TTGTCTCACC CTAAACCCAA 60
CCCAATTCTC TGGGTCTGGG ACTGTATTTA TTTCACTGTC AAGGTTTTAA AGCAATAAGG 120
TCAGGAGACA CACCAGAGAA CAATGTGGTT CTTTATGACA CAGTGGTCAA TAACGTAGTC 180
AGAGAACCTA GGTTCCCTCA ACTTGTTAGC TCTGTGACCT GGGACGAGTA ATGGCTTTGT 240
GGGACAAGTA ATTGCTTATG GGAACTAAAT GAGTTACTCA CACAAAGTCC TCGGCATAAC 300
TTAGCCCAAT ATAGACCCAA GAAGGCCGTG CTTATCACTG TGCTCTGAGC TGGGACTGAC 360
ACCACCCAGT GCATGCTGGG ATGAGACCTG AAGTGATACT AGTTTTCTTA GCCTCAGCCA 420
CTTGTCAGTT AAACAAGGAT GGGAATACTC CTGAGAGTTT CAGGCTCCTG CCTTTGTTTT 480
GAATGAACTG GCAATTGTAA AGGGCCAGTT TACAAATGCT AATGAAACCT AGCTACATTG 540
TTGTTAGGAA AGGAAGCTGG AACTTTGTTT AGACACTGTG TGTGCATGCT GCAGAATAAG 600
GTGGGCTGGG CAGGAGCAAG GGACACACCA AAAATCTTGT AAGTAGCTCA CTTGTGAGAA 660
CATGAGTTGA CTTTGATTAG GAATATCTAT GAGCAACCTT TGGCTGCGGT GGTGTGGTGT 720
GTGTGTGTGT GTGTCTCTGT GTGTGTGTGT GTGTGTGTGT GTATGGACAA ACAGATGGAT 780
GGAGGGGAGG GGACATCACA GAAACATCCA GAAATTAGAG CCAAGAGAGG CAAGCCCTTT 840
TTTGAGGAGC CTGGGTCCAA GACAGCCCTT AGTCTCAACC CAAGGACCTT TGCGCCGAGC 900
ATGACCTAGG CGCCCCCACC CGGTGCTGTA CCCTGAGGTG AGTTGGGTGC TGTCTGACAG 960
AGTGCGTGTG CGCATGTTTG CGGAGTACGC CAGAGAAGAT GCTGCTGGCC TTCCAGAGCC 1020
AGCCTGCAGG AGGAAAGGGG ATGCGGCAAG TAGGCCGCCT CTCGCTGCCT ATGGAAGTGG 1080
CCTGAACTAA AGGCTACAGC ACCCCTTTCT GTGCCTCAGT TTCCCCATGT GCCTGGGGCC 1140
CGAAAGGCAG ATGTGGGGTG GGGGTGCAGG GTCTCAGCGT CGGGTGGTAT TTCGTGGGAG 1200
AGCTGGAGAG CAGGCGAGTG CTGTCCCAGG GTGGGCAGAA GGGCTGGAAA GGGAAGGGTC 1260
GCCAGGTGGG GCGCAGGCTG GCGGAGGAAG GGCGGGCTCT GGGCGCCGCC GCCTTCATCT 1320
TACCCCCACC TCGGCTCCTG AGGCCCGGCG GCTCCTTCCG CCACCCGCGC CGGCTCCTGC 1380
CCGCTCCCCA ACTCGCCCCC GGCCCCGCCT CCGACTCCGC CCCGCCCCCG CCTGTCCCCT 1440