EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-00240

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr1:55131180-55134670

Target genes

Number: 7
Name	Ensembl ID

Sf3b1	ENSMUSG00000025982
Coq10b	ENSMUSG00000025981
Hspe1	ENSMUSG00000073676
Hspd1	ENSMUSG00000025980
Gm16581	ENSMUSG00000089670
Mob4	ENSMUSG00000025979
Mars2	ENSMUSG00000046994

TF binding sites/motifs

Number: 13

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrra	MA0592.2	chr1:55132355-55132366	ATGACCTTGAA	-	6.62
Esrrg	MA0643.1	chr1:55132355-55132365	ATGACCTTGA	-	6.02
Foxd3	MA0041.1	chr1:55132019-55132031	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr1:55132023-55132035	AAACAAACAAAC	-	6.32
Gata4	MA0482.1	chr1:55131706-55131717	AGGAGATAAGA	-	6.14
MEF2A	MA0052.3	chr1:55133507-55133519	GCTAAAAATAAA	+	6.04
NFYA	MA0060.3	chr1:55134623-55134634	TCTGATTGGCT	-	6.32
Nr2f6(var.2)	MA0728.1	chr1:55133594-55133609	AAGGTCCAGAGTTCA	+	6.32
Nr5a2	MA0505.1	chr1:55132354-55132369	GATGACCTTGAACTC	-	8.03
TEAD1	MA0090.2	chr1:55131791-55131801	CACATTCCAT	+	6.02
TEAD4	MA0809.1	chr1:55131791-55131801	CACATTCCAT	+	6.02
ZBTB18	MA0698.1	chr1:55131726-55131739	GAACATCTGGACA	-	6.09
ZBTB18	MA0698.1	chr1:55131311-55131324	ATTCCAGATGTTG	+	6.28

Enhancer Sequence

GAGACAGCTA CATCTGGGTC CTTTCGATAA AATTGTAGCA GTCTCTTGCT GAACCCGGAG 60
CCCACTGATT CTGGCTAGTG GAGCTATATG GGATGCCCAG GGATATCTGT CTCTGCCTCT 120
CAAGTGCTGG GATTCCAGAT GTTGCCATCT CTGTCTGACT TTTTACATGG ATGCCAGAGA 180
TCCAAAAAAT ACTGGTCCTC ATGCATGTAC AGCCAGCACT TTATCCTTTG AGCCATCTCC 240
TTGCCCTGGG AGCGCAGGGT AGGAGCATAA TCCTGATACT CTATCCTACT CTAATTTGCT 300
AAATAGGCTG CTGTCAAATT GCCTTCTACG GAGTTATGTT TACTTGTGGA TTTGTGCCAC 360
TTTTCGTCAG AGTATCTTCT TTGTGCCATG AGTGGTAGTT AATACAGAGA TTTATATGTT 420
AGACTTCTGA GAGTGGCTCA AGTGTTTTAT GCTAAGTGAG ACCTCTACAT TACCCTCTAA 480
GGGCTCAGGG GACATTTTGT GTGAAAGAGT AGAAAGACTA TGAACTAGGA GATAAGAGTG 540
CTGGAGGAAC ATCTGGACAA GACATGGCCT CTGCACTCAG GAACTCATAG CTGTACAAGG 600
TGGAGGAAAT CCACATTCCA TCACGGATGG ATGGGGGAGG GGCTCCTGAG CGCCAACCCC 660
TTCCTAACAG ACTATTCCTA ACAGACTATT GGCAGTTAAT GCTTGCTGAG GAGGGAGGGA 720
GAGGGTGTCA TTTTTTTCAC TGTGTACTCA CTGGTACATT ACTCATGATC CAGTAAAAAA 780
TAAAAATAAA AACTCCTCAA GTCATGCTCA TACAAGCAAC CTTAAACTTT GGGTCATCAA 840
AACAAACAAA CAAACAACCC AGAACAACTT GTATAGAAGA TTCCCATGTG TAAAATTGTC 900
CCAAAAAGAA AAAAGGCAGA GGAATCCTGG AAAGACCAGT GTGTCATGTA CACACATCTT 960
GTCCCAGTCT TCCTGCACTG CGAACTGTTC TTAATTCTTA ATTAATTCAC TTTTCTTTTT 1020
AGGAGTCTGT GCCTTGGAAA TGCCTTCATT ACCTAATGTG TGAGGGCTGC TGATGTGTGA 1080
TAAGCATTCA GTAAATATAA AGTGAATCTA AATCAAGTTT TTATGTTTTC CAGGTTATAT 1140
CTATATATAA CCCTGAACTC ACTATGTATT TTAGGATGAC CTTGAACTCC TGGTCATCCT 1200
GCCCTTGCCT CAGTGCTGGG ATTATAGGTC TGAACCACAC ACCTGATTTA TGCAGCAGAG 1260
GGTGCAGGGC ATGCCATTCT GCCAATAGAG TTAAAGGAAT TCTAATCAGC ACTTGAGAGG 1320
AAGATCTAAC CAGCGAGGGC TACATATAAG ACACTCAAAA AGGAAAAAAA AAATGTCATC 1380
ATAAATTAAA ACTAAGTTGC AAGTCCACCT CCCCACTCTC TGGGGCCTCC AGTTTCTCAA 1440
AGGTTAGGCC CATCTTCTCT CACTGAGGCC AGACTAGGCA GTCCTCTGCT GTATATGTGT 1500
TGGGGACCTG GGACCAGCTT GTGAATGCCG CCTGGTTGGT GGCTCAGTGT CTGAGATCTC 1560
AGAGGTCCAG GTTAGTTGAG ACTGCTCATC TTGGGGCCAT TCTTTTATTC AACCCACCAG 1620
TTACTATTTC ACCTTGTGCT TAGTGAAAGA AAGACTGCCT CTGTAGGGCA ATTTCTATAC 1680
CTTTCTGTGC ATTGCAGATA GTTTCCCATT GACTTAGATA AAAGCAGTTG GCTCCCAGTT 1740
TGAGATGAAG TGTAAGGTGA AATCATGAGG CGTTTCAGAC AGTTGTATCC AATCAGGACG 1800
TTGAGAGTGA TAAAACACAA GGTCAACTGG CTTTCCCCTT TTGATAATGC CTAGGACCCA 1860
AGCGCAGGGA TGGTTCTACA ATGTCAGGGT GGGTGGTTCT CTTTGATAAC CTAATCAAGA 1920
AAAGACCACA ATGCATGCTG AGAGGTTTGT CTCCTAGTTG GTTGTAATGC CCTTCAAGTT 1980
GGTTTTCTGT TGTTTTTTTT TTTTTTCATT TTTCTCTCCT AGACAAGATT TCCCTGTGTA 2040
ACCCTGACTG TCCTGAAACT CAATTTGTAG ACCAAGCTGG TCTCAAAACT CAGAGATCTG 2100
GCTTCTACTA CCCCCTGGGT ACTAGGATTA AAGGCATGTG TCACCACTGG CTTTTTTTTA 2160
TTTCATGTTA ATATTAACCA TCATCATGGG AGAGTCCAAC CTCAGTTCAA GGCAAGGTTT 2220
CAAGACTGAT TTCTCTGTAG CTCTGGCTGT CCTGGGATTC ACTGACTTCA AACTCAAGAG 2280
ATCTGCCTCC TCAGTGCTGG GATGGAAGGC ATACCTCACC ATATCCAGCT AAAAATAAAC 2340
TTTTAAAAGT TTAATAATAA AAATTAAAGC TGGGCTGGTG AGATGGCTTA GTGGGTAAGA 2400
GCACTGCTCT TCCGAAGGTC CAGAGTTCAA ATCCCGGCAA CCACATGGTG GCTCACAACC 2460
ATCCGTAATG AGATCTGACT CCCTCTTCTG GAGTGTCTGA AGACAGCTAC AGTGTACTTA 2520
CATATAATAA ATAAATCTTA AAAAAAAAAT TAAGGCTAGG CAATACTGGC ACACATATTC 2580
AATCCCAGTA TTTGGGAAAC AGCATGGTCT ACAGTCACCA GGATAGCAAG GAGTGGGGGC 2640
GGGAACCAAT CAAAATGCCC TTAAGCACTT CCTGTTACTT CCAGGTTGAC TTAGACCAGA 2700
CTACCTGCAG CTATGAGATC AGGCCAGGCA GTTACTTTGG AAGGGTTTCG GACCCACTCA 2760
CATTTCCCTG GGGTCTCTGC CAGTGGAAAC ACTCCATTGC ATTTTTTCAG ACAAAGCAGT 2820
GTACATCAAG GTTCCTTTCC TCTTGGTTAC TCATTTTTGA AGTAGATGCA AGTACATTTC 2880
CACAGCTAAA CTAACTAAAG AACTAGTGTT TGCTCCCCCT TTTCATTTCT GGCTTATTTG 2940
TTCTATTCTG GAAATTTCCA TCCTTTACTC AAATAAACCC TTTGTGGAAT TACAACCAGC 3000
TTTTGCTTTC ACAGAATGGC CAACTGACTT CAGACTATTT CTGGTGCTCT GCATCCTGCT 3060
ATCTGGCCCT CTTGTTTCTT TTACACCAAG AAATGAATAA TCTTCACTCT TTGAGGGTAA 3120
AGTGAGGGTT GGGGGATTAA ACCTCATAGT GCTTATTTGC TTGGCTAGAT CTCTGGTAAT 3180
TCTAGACTCA CTTAAAAATT CAAGTACTGA AGACTGGTTA AAATGTTAAG TTGCTCATTA 3240
AGTCTTTTTA CTATGGCATA AACTTCAAAA TGGTAAGGAA AGACTAAACT CCTTTATGAT 3300
CACTTATGAT ACTCTCCAAA TCAGTCAAGC TAACCAGTGT TGTGCCTTCT GTAAAACCTC 3360
ACGAAGCAAT AATCCTATCT CCAAGGAAAA GCAAGAGACT ACAGACTATA GGTGGACTGT 3420
TTCTATATAC CCAACTGTGC TCCTCTGATT GGCTTTCATT TCTCCCATCA AGACCATGGA 3480
AAGGGTAACA 3490