EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM054-00058

Organism

Mus musculus

Tissue/cell

ESC_KH2

Coordinate

chr1:13578880-13579680

Target genes

Number: 4
Name	Ensembl ID

Ncoa2	ENSMUSG00000005886
Tram1	ENSMUSG00000025935
Lactb2	ENSMUSG00000025937
Xkr9	ENSMUSG00000067813

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MSC	MA0665.1	chr1:13579120-13579130	AACAGCTGTT	+	6.02
MSC	MA0665.1	chr1:13579120-13579130	AACAGCTGTT	-	6.02
MYF6	MA0667.1	chr1:13579120-13579130	AACAGCTGTT	+	6.02
MYF6	MA0667.1	chr1:13579120-13579130	AACAGCTGTT	-	6.02
Tcf21	MA0832.1	chr1:13579118-13579132	TCAACAGCTGTTAA	-	6.24
Tcf21	MA0832.1	chr1:13579118-13579132	TCAACAGCTGTTAA	+	6.26

Enhancer Sequence

AGACTAGTAA AAATGGATGA CAAAATATTT ATCCTCACTA GGTTACATGC CAGGGAGAGA 60
GGAGACAAAA TGGTAATCAT CAATATATCA ATATATTTAA TGAGACTCAG TGGCTTACAG 120
ATAAAAAAAA AAAAAATGGA AGGGGGAGGG GAGTGGGCGG AAGTACTGAG GAAGGTGGAA 180
AAAAAAAAAA AACCCGTAGG ATGTTACAGG TTCACCTTGC AAACTTTATT ACCCACATTC 240
AACAGCTGTT AAATAAGTCA TCAAAATACT CAGATCTGTG GGAAGAGAAT TTACACACTC 300
CTGACAGTCT CATCGCCTCT GCTTCAAGAA AGGAAATCGC TCAACTCCTC AACACAGCTG 360
TTGCGAGCCT CGCATCGGGA TCAGACCCGA TGCTCCGGGA ACCCAGAGTC CAGAGCCCAG 420
GCGGAAAGTT GGACGAGCGG CCGTCGGCGG GCAGGGGGCC ACCGGGTTCG AACACCCGGT 480
CCTCGCCCTC CGCGCAGGCA GCGGCCGAGG CCGTGGGTCG GGGTCGAGCA GGGGTCCCTG 540
TTAGTCATCC GGCCCCGCTG CCCCGGCCCC GGGTCCGCCC ATCGCGCAGG GCCAGCACGG 600
CCGCGCCCGC CACCCCCGCC GGCCCCTCGC CGGCTGCCAC GTAACCCTTC GCGGGAAGCA 660
GGAACTGCGC GGCGCGGGAG GGGGCGGCGG GCCGGACCGG GCCAGGGCTG CAGGGCCGCG 720
GGGGGCTGCG CAGCTCCGGC CGGGTACGCT AGGGTCGGCG GGCCTGGCCA GGGGTCCGGG 780
GTCCGGGAAG GAGGGCTCAC 800