EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM053-02206

Organism

Mus musculus

Tissue/cell

ESC_J1

Coordinate

chr1:193218500-193220110

Target genes

Number: 6
Name	Ensembl ID

Nsl1	ENSMUSG00000062510
Nenf	ENSMUSG00000037499
Ppp2r5a	ENSMUSG00000026626
Dtl	ENSMUSG00000037474
Ints7	ENSMUSG00000037461
Nek2	ENSMUSG00000026622

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOS	MA0476.1	chr1:193219383-193219394	TGTGACTCATT	+	6.62
SOX10	MA0442.2	chr1:193218895-193218906	AAAACAAAGGA	+	6.32
Sox3	MA0514.1	chr1:193218895-193218905	AAAACAAAGG	-	6.02
ZEB1	MA0103.3	chr1:193220050-193220061	GCGCAGGTGGG	-	6.62

Enhancer Sequence

TATTTTCAAG TAAAAAGTTT TACTTCCTCA ATCGAATCTG CATCAGTTTA TCATGAATAA 60
TACCTTATGG GGAACACTAT ACACGCAAAT TTCAATTTCT TTCTACTACT GACCAAATTC 120
TGTATGTGAA AACATTGGCA GTTCCTGCTA CATCTTCAAC CAAACATCAG GTAACTTTGA 180
GTCTGATTAC TGATTCTGTG GATTTCTGTC CGTCTTAAAG GCAAAATCTA CTACAGAGGC 240
ATCTCAAGAC TAACCAGATG TTTAAAATTC AATTACTAGC AGAGGAACTA AGAAGTACAA 300
CACTAAGAAG AAGAAAACCA CGTTAGCAAA TTAGATACAT AAGAAAAATG CTAGTATCGA 360
GACTTCAAAC TAAAATTAAC AGGATAAACT AATGAAAAAC AAAGGATAAA ATAACTCTTA 420
ATTAAGTATA AAAGCTTAAA CCTCTGAGTA GCAATTCACT ATCCTAACAG GTAGGACAGA 480
GTTATTTTAG GCTATGGCTG CACTCCACTG ACAGTGCTGT ATCAATTTGA ACAATTCTAG 540
TATGGTAAAG AGCAATAAAG CAACAAATGA GACACCACAC ACCTAACATA AACTATTTTC 600
AAAAGTCTGT GTGATTCTAC CAGTGGTATA TCCTTAATTC AGAAGCACCC CGAGAGGCAG 660
ATGTAGAGTT TAAATGGGGT TCCAAGCTGT TGCTGGTCAA CTGTTGATTT GATCTAGGGT 720
TTTCTTTACA CTCCTTGCCA AACTAAGTCA GGATTCATAG ACTCAAAGAC AAATCACAAC 780
CAGATTGGCC TTGAAAGGGA TGCTGGATCT TTGTCAAAAG AATTGAAAAA TCTGCTGATC 840
ATTTATCTAT TTTGGCATGA GCCTTTCTTT TATTTCTTGG CCTTGTGACT CATTCTCTAG 900
GTTTCTATCA GGTTGCAAAG AATTTCTTAA ATATCTAGGA ACATAAACAT CTTTTCCATT 960
AATGACATCT AGCTCATAAA ATGCAAAGAC GTAAAATTAT TAAATTAAAA GCCAGTAATT 1020
CTCAAAGAAT AAGCAAGAAC GCCAGTAAAC AACTCATGAA AAGCCTCCAA ACCGGGTGAG 1080
AAAAGAGAGC CAAAAGGAGT GCCAAGCACT CCTGCGAGGC ATTAGGCACG GATACCAATC 1140
TGAATTACTT ACAAAACCTT ACAAAGTCCT TGGAAGCATA GCCGCGCTAA CCAAGTTCCC 1200
GTTCCACGGC AAAGAAATTA CTCTTCCTTC ATAACCTCTC CAAAGACAAT CGAGGTCTTC 1260
TGAGGTATAA CATTTACGTC TAACGAGACA GTAAGATCTG TCACCTGGTC CCGGTTTTAA 1320
GCTAGTTCTA TATAGCTACG TCTAAAGGCC AGCTAACTCG GCAGCAGTTT GTTTGGACCC 1380
TGGATGTGAC AACTGAGGGA CAAACAGAGA AAGAGAAGAA CTAGCTAAGC TTGGAGAAAA 1440
CCAGGGTTGA GGCTCAGCGA GGCAGGGAGT CGAAAGACTG GACGAGGGAA GGGAGCGCAG 1500
GTACCTCTGG GGACCCTGAA ATCGCCAAGG CAAGGGCAGG CGGGGCAAGC GCGCAGGTGG 1560
GAAGGGGAGT AGGGCTTGCC CCGGGAGCGC GGGCCAGGGG CGGCCGGGGG 1610