EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM046-03226

Organism

Mus musculus

Tissue/cell

ESC_Bruce4

Coordinate

chr8:87176690-87178090

Target genes

Number: 17
Name	Ensembl ID

Gm16183	ENSMUSG00000086067
Ier2	ENSMUSG00000053560
Gm2529	ENSMUSG00000073822
Trmt1	ENSMUSG00000001909
Nacc1	ENSMUSG00000001910
Lyl1	ENSMUSG00000034041
G430095P16Rik	ENSMUSG00000074203
Gadd45gip1	ENSMUSG00000033751
Dand5	ENSMUSG00000053226
Rad23a	ENSMUSG00000003813
Calr	ENSMUSG00000003814
Farsa	ENSMUSG00000003808
Syce2	ENSMUSG00000003824
Gcdh	ENSMUSG00000003809
Prdx2	ENSMUSG00000005161
Asna1	ENSMUSG00000052456
AC163703.1	ENSMUSG00000089213

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MEOX1	MA0661.1	chr8:87177113-87177123	GCTAATTAAC	+	6.02
OLIG2	MA0678.1	chr8:87176932-87176942	ACCATATGGT	+	6.02
OLIG2	MA0678.1	chr8:87176932-87176942	ACCATATGGT	-	6.02

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_05527	chr8:87177182-87177972	E14.5_Limb
mSE_10028	chr8:87177282-87179796	Embryonic_stem_cells

Enhancer Sequence

TCAGACACAC CAGAAGAGGG CATCAGATCT CATTATGGAT GGTTGTGAGC CACCATGTGG 60
TTGCAGGGAT TTGAACTCAG GACCTTTGGA AGAGCAGTCA GTGCTCTTAA CCGCCGAGCC 120
ATCTCTCCAG CCCCCTGATT TTTTTTTTAA AGATTTATTT ATCGCTATAT GTAAATTCAC 180
TGTAGCTGTC TTCAGACTCA CCAGAAGAGG TCGTCAGATC TCATTATAGA TGGTTTTGAG 240
CCACCATATG GTTGCTGGGA ATTGAACTCA GGAAGAGCAG TCAGGTCTCT TAACCGCTGA 300
GCCATCTCTC CAGCCCGTTT TGTTTTGTTT TGTTTTAAAC AGGTCTCCTT TATGTAGCTG 360
TGAAAAGGCC AGTTTAGGAA ATTTGGGAAG GTCATAAAAC ACTTGCCCCT CCAGAAGGAA 420
GAGGCTAATT AACATTTCTC AGACCACCGG GTGGAACTGA CCTGCGGGTG GGGACACATT 480
CCTCAGGACC GACTGCTGCC CTCCTTCAGA CAAGGGAAGT CCTTGTCACC TCATTCCCTA 540
AAGACCAATC AGTTTAAAGG GTGCACTGTT CCGCCAATCA TACTGTGCCT AGTTGCTGAT 600
GCTCCATTCC GCCCCTGGAA ACCATATAAA AACTCGCTGT ACGGGTGCTG GGGATTGCCT 660
TCTCCTTGAG TCTGGGACAA CCCCAGTGCA CTGGAACAAT AAATTCCTCT TGCTGTTTGC 720
ATGGCTCTCT GCTCCACTTG GCCACTCTGG GGGTTCCTGG TAAGCTAAGG CTCCACGGAG 780
TCTTACAGCT GGTACTACTA GACTGGAACT TGCTCTATAG ATGACAACAG TTTTGCTTGC 840
CTGCCTCTGC CTCAGAAATA CTGGGATTAA AGTGTTGGTA TCTCTTGTGG CTGGCTAATG 900
GTAGAGAGAT TTCTCCCCCA GCACTGGGAA AAGAGAGAAG GAAAGAACAG TGTTTTCTGA 960
GAGATAGATT GTTGTTGACA AGATCTCATC CTGTAGCTGT TAGAAATATT ATTACAGTCC 1020
TCTCTCAGTA TGAGGGTGAT TAGATTTCGT TGTAGTTGCA GATAAGCAGG TGCTGCTACA 1080
GCCCCTCGCT CCTCCAGCTG GCAGCTGCTT GTCTCAGGAC TCAGAGTCAG AAAATTACAG 1140
GGGATATATG CTCATGACTG AACCCTAAAT TGTTCACTGG ATGAGGCTTT GTGTCCTAGT 1200
CAGTGAGATG GATAGAAGGG GACAGGAATT TCTGGACACC AGACTATATT TATTTTACAG 1260
GCGTTTAAGT CAAGATCTCA CTATGTAGCA TTGACTGGAT TGGAACTGGC TCTGAAGATC 1320
AGGCTGGCCT AAAATTTAGA GATTCACCTG TCTCTGTCTC CTGAGTGGCA CCACTGTGCC 1380
TCAATAAATA GAATTTTATC 1400